Evidence map›Paper›PMID 25725069›Full record

ArticleDevelopment (Cambridge, England)2015

Second-generation Notch1 activity-trap mouse line (N1IP::CreHI) provides a more comprehensive map of cells experiencing Notch1 activity.

Zhenyi Liu, Eric Brunskill, Scott Boyle, Shuang Chen, Mustafa Turkoz, Yuxuan Guo, Rachel Grant, Raphael Kopan

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Recent advances inFrontiers in cell and developmental biology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zhenyi LiuSAGE Labs, St Louis, MO 63146, USA Department of Developmental Biology, Washington University, St Louis, MO 63110, USA.
Eric BrunskillDivision of Developmental Biology, Children's Hospital Medical Center, Cincinnati, OH 45229, USA.
Scott BoyleDepartment of Developmental Biology, Washington University, St Louis, MO 63110, USA.
Shuang ChenDepartment of Developmental Biology, Washington University, St Louis, MO 63110, USA Division of Developmental Biology, Children's Hospital Medical Center, Cincinnati, OH 45229, USA.
Mustafa TurkozDepartment of Developmental Biology, Washington University, St Louis, MO 63110, USA Division of Developmental Biology, Children's Hospital Medical Center, Cincinnati, OH 45229, USA.
Yuxuan GuoDepartment of Developmental Biology, Washington University, St Louis, MO 63110, USA Carnegie Institution for Science, Department of Embryology, Baltimore, MD 21218, USA.
Rachel GrantDepartment of Developmental Biology, Washington University, St Louis, MO 63110, USA.
Raphael KopanDepartment of Developmental Biology, Washington University, St Louis, MO 63110, USA Division of Developmental Biology, Children's Hospital Medical Center, Cincinnati, OH 45229, USA Raphael.Kopan@cchmc.org.
Washington University in St. Louis · USCincinnati Children's Hospital Medical Center · US

Funding

BIOCHEMICAL AND GENETIC ANALYSIS OF NOTCH SIGNALINGR01GM055479 · NIGMS · WASHINGTON UNIVERSITY · PI KOPAN, RAPHAEL, WEIRAUCH, MATTHEW TYSON · 1996 to 2021
$6.4M
ROLE OF NOTCH AND KIDNEY DEVELOPMENTR01DK066408 · NIDDK · WASHINGTON UNIVERSITY · PI KOPAN, RAPHAEL · 2004 to 2012
$3.4M
NIDDK NIH HHS R01 DK066408NIDDK NIH HHS R01DK066408NIGMS NIH HHS R01 GM055479NIGMS NIH HHS R01GM55479
6 · The paper itself

Abstract

We have previously described the creation and analysis of a Notch1 activity-trap mouse line, Notch1 intramembrane proteolysis-Cre6MT or N1IP::Cre(LO), that marked cells experiencing relatively high levels of Notch1 activation. Here, we report and characterize a second line with improved sensitivity (N1IP::Cre(HI)) to mark cells experiencing lower levels of Notch1 activation. This improvement was achieved by increasing transcript stability and by restoring the native carboxy terminus of Cre, resulting in a five- to tenfold increase in Cre activity. The magnitude of this effect probably impacts Cre activity in strains with carboxy-terminal Ert2 fusion. These two trap lines and the related line N1IP::Cre(ERT2) form a complementary mapping tool kit to identify changes in Notch1 activation patterns in vivo as the consequence of genetic or pharmaceutical intervention, and illustrate the variation in Notch1 signal strength from one tissue to the next and across developmental time.

Indexed as

AnimalsBlotting, WesternCell LineFibroblastsGalactosidesGene Knock-In TechniquesImmunohistochemistryIndolesIntegrasesMiceReceptor, Notch1Signal TransductionTransfection5-bromo-4-chloro-3-indolyl beta-galactosideCre recombinaseGalactosidesIndolesIntegrasesNotch1 protein, mouseReceptor, Notch1ActivityCreKidneyNeuronNotch1

Identifiers

PMID25725069
PMCPMC4360173
OpenAlexW1982034802

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.