Evidence map›Paper›PMID 25724639›Full record

ArticleThe Plant cell2015

An upstream open reading frame is essential for feedback regulation of ascorbate biosynthesis in Arabidopsis.

William A Laing, Marcela Martínez-Sánchez, Michele A Wright, Sean M Bulley, Di Brewster, Andrew P Dare, Maysoon Rassam, Daisy Wang, Roy Storey, Richard C Macknight and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
32.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 226 citations in OpenAlex.

  1. Article
  2. Ribosome stalling position, spacing, and A-site occupancy impact translation and cotranslational mRNA decay in plants.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Identification of Potentially Coding Small ORFs in Plant Transcriptomes.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Tissue- and Condition-Specific Biosynthesis of Ascorbic Acid inInternational journal of molecular sciences · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Ascorbic acid metabolism and functions.Journal of experimental botany · 2024
    Article
  19. Review
  20. Review

43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

William A LaingThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand william.laing@plantandfood.co.nz.ORCID http://orcid.org/0000-0003-0458-6590
Marcela Martínez-SánchezThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Michele A WrightThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Sean M BulleyThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Di BrewsterThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Andrew P DareThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Maysoon RassamThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Daisy WangThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Roy StoreyThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand.
Richard C MacknightThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand Biochemistry Department, University of Otago, Dunedin 9054, New Zealand.
Roger P HellensThe New Zealand Institute for Plant and Food Research, Auckland 1142, New Zealand Biochemistry Department, University of Otago, Dunedin 9054, New Zealand.
Plant & Food Research · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ascorbate (vitamin C) is an essential antioxidant and enzyme cofactor in both plants and animals. Ascorbate concentration is tightly regulated in plants, partly to respond to stress. Here, we demonstrate that ascorbate concentrations are determined via the posttranscriptional repression of GDP-l-galactose phosphorylase (GGP), a major control enzyme in the ascorbate biosynthesis pathway. This regulation requires a cis-acting upstream open reading frame (uORF) that represses the translation of the downstream GGP open reading frame under high ascorbate concentration. Disruption of this uORF stops the ascorbate feedback regulation of translation and results in increased ascorbate concentrations in leaves. The uORF is predicted to initiate at a noncanonical codon (ACG rather than AUG) and encode a 60- to 65-residue peptide. Analysis of ribosome protection data from Arabidopsis thaliana showed colocation of high levels of ribosomes with both the uORF and the main coding sequence of GGP. Together, our data indicate that the noncanonical uORF is translated and encodes a peptide that functions in the ascorbate inhibition of translation. This posttranslational regulation of ascorbate is likely an ancient mechanism of control as the uORF is conserved in GGP genes from mosses to angiosperms.

Indexed as

Feedback, PhysiologicalGene Expression Regulation, Plant5' Untranslated RegionsAmino Acid SequenceArabidopsisAscorbic AcidBiosynthetic PathwaysCodonDown-RegulationGalactoseLuciferasesMolecular Sequence DataOpen Reading FramesPeptidesPhosphotransferasesPlant Leaves5' Untranslated RegionsAscorbic AcidCodonGalactoseLuciferasesPeptidesPhosphotransferases

Identifiers

PMID25724639
PMCPMC4558653
OpenAlexW2113946674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.