Evidence map›Paper›PMID 25724638›Full record

ArticleThe Plant cell2015

In planta variation of volatile biosynthesis: an alternative biosynthetic route to the formation of the pathogen-induced volatile homoterpene DMNT via triterpene degradation in Arabidopsis roots.

Reza Sohrabi, Jung-Hyun Huh, Somayesadat Badieyan, Liva Harinantenaina Rakotondraibe, Daniel J Kliebenstein, Pablo Sobrado, Dorothea Tholl

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 88 citations in OpenAlex.

  1. Underground Signals: The Ecological Power of Root Volatiles.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Sterols in plant biologyCell surface (Amsterdam, Netherlands) · 2025
    Review
  9. Article
  10. Article
  11. MAPK Cascades in Plant Microbiota Structure and Functioning.Journal of microbiology (Seoul, Korea) · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Genome-Wide Identification ofCurrent issues in molecular biology · 2022
    Article
  18. Article
  19. Overexpression of thePlants (Basel, Switzerland) · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Reza SohrabiDepartment of Biological Sciences, Virginia Tech, Blacksburg, Virginia 24061.ORCID http://orcid.org/0000-0003-1621-8496
Jung-Hyun HuhDepartment of Biological Sciences, Virginia Tech, Blacksburg, Virginia 24061.
Somayesadat BadieyanDepartment of Biochemistry, Virginia Tech, Blacksburg, Virginia 24061.
Liva Harinantenaina RakotondraibeDepartment of Chemistry, Virginia Tech, Blacksburg, Virginia 24061.
Daniel J KliebensteinDepartment of Plant Science, University of California, Davis, California 95616.
Pablo SobradoDepartment of Biochemistry, Virginia Tech, Blacksburg, Virginia 24061.
Dorothea ThollDepartment of Biological Sciences, Virginia Tech, Blacksburg, Virginia 24061 tholl@vt.edu.ORCID http://orcid.org/0000-0003-2636-6345
Virginia Tech · USCarnegie Department of Plant Biology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant-derived volatile compounds such as terpenes exhibit substantial structural variation and serve multiple ecological functions. Despite their structural diversity, volatile terpenes are generally produced from a small number of core 5- to 20-carbon intermediates. Here, we present unexpected plasticity in volatile terpene biosynthesis by showing that irregular homo/norterpenes can arise from different biosynthetic routes in a tissue specific manner. While Arabidopsis thaliana and other angiosperms are known to produce the homoterpene (E)-4,8-dimethyl-1,3,7-nonatriene (DMNT) or its C16-analog (E,E)-4,8,12-trimethyl-1,3,7,11-tridecatetraene by the breakdown of sesquiterpene and diterpene tertiary alcohols in aboveground tissues, we demonstrate that Arabidopsis roots biosynthesize DMNT by the degradation of the C30 triterpene diol, arabidiol. The reaction is catalyzed by the Brassicaceae-specific cytochrome P450 monooxygenase CYP705A1 and is transiently induced in a jasmonate-dependent manner by infection with the root-rot pathogen Pythium irregulare. CYP705A1 clusters with the arabidiol synthase gene ABDS, and both genes are coexpressed constitutively in the root stele and meristematic tissue. We further provide in vitro and in vivo evidence for the role of the DMNT biosynthetic pathway in resistance against P. irregulare. Our results show biosynthetic plasticity in DMNT biosynthesis in land plants via the assembly of triterpene gene clusters and present biochemical and genetic evidence for volatile compound formation via triterpene degradation in plants.

Indexed as

Biosynthetic PathwaysArabidopsisChromatography, GasGene Expression Regulation, PlantGenes, PlantMass SpectrometryMolecular Docking SimulationOrgan SpecificityPlant RootsPythiumSaccharomyces cerevisiaeSubstrate SpecificityTerpenesTriterpenesVolatile Organic Compounds4,8-dimethyl-1,3,7-nonatrienearabidiolTerpenesTriterpenesVolatile Organic Compounds

Identifiers

PMID25724638
PMCPMC4558649
OpenAlexW2127101873

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.