Evidence map›Paper›PMID 25723539›Full record

ArticlePLoS genetics2015

Drosophila casein kinase I alpha regulates homolog pairing and genome organization by modulating condensin II subunit Cap-H2 levels.

Huy Q Nguyen, Jonathan Nye, Daniel W Buster, Joseph E Klebba, Gregory C Rogers, Giovanni Bosco

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome control by SMC complexes.Nature reviews. Molecular cell biology · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Casein kinase 1α: biological mechanisms and theranostic potential.Cell communication and signaling : CCS · 2018
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Oxidative stress in oocytes during midprophase induces premature loss of cohesion and chromosome segregation errors.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Huy Q NguyenGeisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.
Jonathan NyeDepartment of Cellular and Molecular Medicine, University of Arizona Cancer Center, University of Arizona, Tucson, Arizona, United States of America.
Daniel W BusterDepartment of Cellular and Molecular Medicine, University of Arizona Cancer Center, University of Arizona, Tucson, Arizona, United States of America.
Joseph E KlebbaDepartment of Cellular and Molecular Medicine, University of Arizona Cancer Center, University of Arizona, Tucson, Arizona, United States of America.
Gregory C RogersDepartment of Cellular and Molecular Medicine, University of Arizona Cancer Center, University of Arizona, Tucson, Arizona, United States of America.
Giovanni BoscoGeisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.
University of Arizona Cancer CenterDartmouth College · USUniversity of Arizona · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Developmental control of replication by Drosophila RBR01GM069462 · NIGMS · UNIVERSITY OF ARIZONA · PI BOSCO, GIOVANNI · 2004 to 2012
$2.5M
NCI NIH HHS P30 CA023108NIGMS NIH HHS R01 GM069462
6 · The paper itself

Abstract

The spatial organization of chromosomes within interphase nuclei is important for gene expression and epigenetic inheritance. Although the extent of physical interaction between chromosomes and their degree of compaction varies during development and between different cell-types, it is unclear how regulation of chromosome interactions and compaction relate to spatial organization of genomes. Drosophila is an excellent model system for studying chromosomal interactions including homolog pairing. Recent work has shown that condensin II governs both interphase chromosome compaction and homolog pairing and condensin II activity is controlled by the turnover of its regulatory subunit Cap-H2. Specifically, Cap-H2 is a target of the SCFSlimb E3 ubiquitin-ligase which down-regulates Cap-H2 in order to maintain homologous chromosome pairing, chromosome length and proper nuclear organization. Here, we identify Casein Kinase I alpha (CK1α) as an additional negative-regulator of Cap-H2. CK1α-depletion stabilizes Cap-H2 protein and results in an accumulation of Cap-H2 on chromosomes. Similar to Slimb mutation, CK1α depletion in cultured cells, larval salivary gland, and nurse cells results in several condensin II-dependent phenotypes including dispersal of centromeres, interphase chromosome compaction, and chromosome unpairing. Moreover, CK1α loss-of-function mutations dominantly suppress condensin II mutant phenotypes in vivo. Thus, CK1α facilitates Cap-H2 destruction and modulates nuclear organization by attenuating chromatin localized Cap-H2 protein.

Indexed as

Adenosine TriphosphatasesAnimalsCasein Kinase IalphaCentromereChromatinChromosomal Proteins, Non-HistoneChromosome PairingDNA-Binding ProteinsDrosophilaDrosophila ProteinsMitosisMultiprotein ComplexesSalivary GlandsAdenosine TriphosphatasesCap-H2 protein, DrosophilaCasein Kinase IalphaChromatinChromosomal Proteins, Non-Histonecondensin complexesDNA-Binding ProteinsDrosophila ProteinsMultiprotein Complexes

Identifiers

PMID25723539
PMCPMC4344196
OpenAlexW1995047706

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.