Evidence map›Paper›PMID 25723387›Full record

ArticleViruses2015

Genomic and phylogenetic characterization of novel, recombinant H5N2 avian influenza virus strains isolated from vaccinated chickens with clinical symptoms in China.

Huaiying Xu, Fang Meng, Dihai Huang, Xiaodan Sheng, Youling Wang, Wei Zhang, Weishan Chang, Leyi Wang, Zhuoming Qin

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Huaiying XuInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China. hyingxu@163.com.
Fang MengDepartment of Preventive Veterinary Medicine, College of Veterinary Medicine, Shandong Agricultural University, Tai'an, Shandong 271018, China. mfshd@163.com.
Dihai HuangInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China. hhddhh@163.com.
Xiaodan ShengInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China. sxd1985wl@163.com.
Youling WangInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China. wangyouling71@163.com.
Wei ZhangInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China. weizhang1128@126.com.
Weishan ChangDepartment of Preventive Veterinary Medicine, College of Veterinary Medicine, Shandong Agricultural University, Tai'an, Shandong 271018, China. wschang@sdau.edu.cn.
Leyi WangAnimal Diseases Diagnostic Laboratory, Ohio Department of Agriculture, Reynoldsburg, OH 43068, USA. wang.1074@buckeyemail.osu.edu.
Zhuoming QinInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan, Shandong 250100, China. qinzm1997@163.com.
Shandong Academy of Agricultural Sciences · CNShandong Agricultural University · CNOhio Department of Agriculture · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infection of poultry with diverse lineages of H5N2 avian influenza viruses has been documented for over three decades in different parts of the world, with limited outbreaks caused by this highly pathogenic avian influenza virus. In the present study, three avian H5N2 influenza viruses, A/chicken/Shijiazhuang/1209/2013, A/chicken/Chiping/0321/2014, and A/chicken/Laiwu/0313/2014, were isolated from chickens with clinical symptoms of avian influenza. Complete genomic and phylogenetic analyses demonstrated that all three isolates are novel recombinant viruses with hemagglutinin (HA) and matrix (M) genes derived from H5N1, and remaining genes derived from H9N2-like viruses. The HA cleavage motif in all three strains (PQIEGRRRKR/GL) is characteristic of a highly pathogenic avian influenza virus strain. These results indicate the occurrence of H5N2 recombination and highlight the importance of continued surveillance of the H5N2 subtype virus and reformulation of vaccine strains.

Indexed as

PhylogenyAnimalsChickensChinaGenome, ViralInfluenza A Virus, H5N1 SubtypeInfluenza A Virus, H5N2 SubtypeInfluenza A Virus, H9N2 SubtypeInfluenza in BirdsInfluenza VaccinesMolecular Sequence DataReassortant VirusesRecombination, GeneticRNA, ViralSequence Analysis, DNAInfluenza VaccinesRNA, Viral

Identifiers

PMID25723387
PMCPMC4379553
OpenAlexW2171313701

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.