Evidence map›Paper›PMID 25722249›Full record

ArticleScientific reports2015

Structurally governed cell mechanotransduction through multiscale modeling.

John Kang, Kathleen M Puskar, Allen J Ehrlicher, Philip R LeDuc, Russell S Schwartz

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Multiscale mechanobiology: computational models for integrating molecules to multicellular systems.Integrative biology : quantitative biosciences from nano to macro · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John KangLane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Kathleen M PuskarDept. of Mechanical Engineering Technology, Point Park University, Pittsburgh, PA 15222, USA.
Allen J EhrlicherDept. of Bioengineering, McGill University, Montreal, Quebec H3A 0C3, Canada.
Philip R LeDuc1] Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA [2] Dept. of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Russell S Schwartz1] Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA [2] Dept. of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.

Funding

Integrated Interdisciplinary, inter-university PhD Program Computational Biology (T32)T32EB009403 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BAHAR, IVET, BAR-JOSEPH, ZIV · 2009 to 2023
$4.4M
Heterogeneous Cancer Progression from Microarray DataR01CA140214 · NCI · CARNEGIE-MELLON UNIVERSITY · PI SCHWARTZ, RUSSELL S · 2009 to 2013
$1.4M
Inferring in vivo Capsid Assembly Kinetics from in vitro by Stochastic SimulationR01AI076318 · NIAID · CARNEGIE-MELLON UNIVERSITY · PI SCHWARTZ, RUSSELL S · 2009 to 2012
$1.1M
NCI NIH HHS R01 CA140214NCI NIH HHS R01CA140214NIAID NIH HHS R01 AI076318NIAID NIH HHS R01AI076318NIBIB NIH HHS T32 EB009403
6 · The paper itself

Abstract

Mechanotransduction has been divided into mechanotransmission, mechanosensing, and mechanoresponse, although how a cell performs all three functions using the same set of structural components is still highly debated. Here, we bridge the gap between emerging molecular and systems-level understandings of mechanotransduction through a multiscale model linking these three phases. Our model incorporates a discrete network of actin filaments and associated proteins that responds to stretching through geometric relaxation. We assess three potential activating mechanisms at mechanosensitive crosslinks as inputs to a mixture model of molecular release and benchmark each using experimental data of mechanically-induced Rho GTPase FilGAP release from actin-filamin crosslinks. Our results suggest that filamin-FilGAP mechanotransduction response is best explained by a bandpass mechanism favoring release when crosslinking angles fall outside of a specific range. Our model further investigates the difference between ordered versus disordered networks and finds that a more disordered actin network may allow a cell to more finely tune control of molecular release enabling a more robust response.

Indexed as

Mechanotransduction, CellularActin CytoskeletonComputer SimulationCytoskeletal ProteinsFilaminsGTPase-Activating ProteinsModels, BiologicalCytoskeletal ProteinsFilaminsGTPase-Activating Proteins

Identifiers

PMID25722249
PMCPMC4342557

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.