Evidence map›Paper›PMID 25720653›Full record

ArticleScientific reports2015

Proteomic identification of early salicylate- and flg22-responsive redox-sensitive proteins in Arabidopsis.

Pei Liu, Huoming Zhang, Boying Yu, Liming Xiong, Yiji Xia

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
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  5. DecodingPlants (Basel, Switzerland) · 2024
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  6. RNA NNon-coding RNA · 2024
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  9. Review
  10. Proteomic Analysis of the Antibacterial Effect of Improved Dian Dao San againstEvidence-based complementary and alternative medicine : eCAM · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. TALEN-BasedFrontiers in plant science · 2021
    Article
  17. Review
  18. Redox Components: Key Regulators of Epigenetic Modifications in Plants.International journal of molecular sciences · 2020
    Review
  19. Identification of Sulfenylated Cysteines inFrontiers in plant science · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Pei Liu1] Department of Biology, Hong Kong Baptist University, Kowloon, Hong Kong [2] Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Huoming ZhangBiosciences Core Laboratory, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Boying YuDepartment of Biology, Hong Kong Baptist University, Kowloon, Hong Kong.
Liming XiongBiological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Yiji Xia1] Department of Biology, Hong Kong Baptist University, Kowloon, Hong Kong [2] Partner State Key Laboratory of Agrobiotechnology, Chinese University of Hong Kong, Shatin, Hong Kong.
Hong Kong Baptist University · HKKing Abdullah University of Science and Technology · SAChinese University of Hong Kong · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accumulation of reactive oxygen species (ROS) is one of the early defense responses against pathogen infection in plants. The mechanism about the initial and direct regulation of the defense signaling pathway by ROS remains elusive. Perturbation of cellular redox homeostasis by ROS is believed to alter functions of redox-sensitive proteins through their oxidative modifications. Here we report an OxiTRAQ-based proteomic study in identifying proteins whose cysteines underwent oxidative modifications in Arabidopsis cells during the early response to salicylate or flg22, two defense pathway elicitors that are known to disturb cellular redox homeostasis. Among the salicylate- and/or flg22-responsive redox-sensitive proteins are those involved in transcriptional regulation, chromatin remodeling, RNA processing, post-translational modifications, and nucleocytoplasmic shuttling. The identification of the salicylate-/flg22-responsive redox-sensitive proteins provides a foundation from which further study can be conducted toward understanding biological significance of their oxidative modifications during the plant defense response.

Indexed as

ArabidopsisArabidopsis ProteinsCells, CulturedFlagellinGene Expression Regulation, PlantOxidation-ReductionProtein BiosynthesisProteomeProteomicsReactive Oxygen SpeciesSalicylatesTranscriptional ActivationArabidopsis ProteinsFlagellinProteomeReactive Oxygen SpeciesSalicylates

Identifiers

PMID25720653
PMCPMC4342551
OpenAlexW2076124670

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.