ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2014
tranSMART: An Open Source Knowledge Management and High Content Data Analytics Platform.
Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
34 citing papers in PubMed.
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- Building Flexible, Scalable, and Machine Learning-Ready Multimodal Oncology Datasets.Sensors (Basel, Switzerland) · 2024Article
- Opportunities and Challenges in High-Quality Contemporary Data Collection in Traumatic Brain Injury: The CENTER-TBI Experience.Neurocritical care · 2022Review
- An atomic approach to the design and implementation of a research data warehouse.Journal of the American Medical Informatics Association : JAMIA · 2022Article
- Open-source Software Sustainability Models: Initial White Paper From the Informatics Technology for Cancer Research Sustainability and Industry Partnership Working Group.Journal of medical Internet research · 2021Review
- The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer.Frontiers in artificial intelligence · 2021Article
- What You Need to Know Before Implementing a Clinical Research Data Warehouse: Comparative Review of Integrated Data Repositories in Health Care Institutions.JMIR formative research · 2020Review
- Enabling Agile Clinical and Translational Data Warehousing: Platform Development and Evaluation.JMIR medical informatics · 2020Article
- Introducing PIONEER: a project to harness big data in prostate cancer research.Nature reviews. Urology · 2020Review
- The Genomics Research and Innovation Network: creating an interoperable, federated, genomics learning system.Genetics in medicine : official journal of the American College of Medical Genetics · 2020Article
- Multi-omics Data Integration, Interpretation, and Its Application.Bioinformatics and biology insights · 2020Review
- Validation of Plasma Proteomic Biomarkers Relating to Brain Amyloid Burden in the EMIF-Alzheimer's Disease Multimodal Biomarker Discovery Cohort.Journal of Alzheimer's disease : JAD · 2020Article
- Molecular stratification of idiopathic nephrotic syndrome.Nature reviews. Nephrology · 2019Review
- The use or generation of biomedical data and existing medicines to discover and establish new treatments for patients with rare diseases - recommendations of the IRDiRC Data Mining and Repurposing Task Force.Orphanet journal of rare diseases · 2019Article
- Development of an informatics system for accelerating biomedical research.F1000Research · 2019Article
- Phelan-McDermid syndrome data network: Integrating patient reported outcomes with clinical notes and curated genetic reports.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2018Article
- The EMIF-AD Multimodal Biomarker Discovery study: design, methods and cohort characteristics.Alzheimer's research & therapy · 2018Article
- Data Integration for Future Medicine (DIFUTURE).Methods of information in medicine · 2018Article
- MIRACUM: Medical Informatics in Research and Care in University Medicine.Methods of information in medicine · 2018Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The tranSMART knowledge management and high-content analysis platform is a flexible software framework featuring novel research capabilities. It enables analysis of integrated data for the purposes of hypothesis generation, hypothesis validation, and cohort discovery in translational research. tranSMART bridges the prolific world of basic science and clinical practice data at the point of care by merging multiple types of data from disparate sources into a common environment. The application supports data harmonization and integration with analytical pipelines. The application code was released into the open source community in January 2012, with 32 instances in operation. tranSMART's extensible data model and corresponding data integration processes, rapid data analysis features, and open source nature make it an indispensable tool in translational or clinical research.
Identifiers
25717408PMC4333702What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.