Evidence map›Paper›PMID 25717236›Full record

ArticleWorld journal of gastroenterology2015

Depletion of the IKBKAP ortholog in zebrafish leads to hirschsprung disease-like phenotype.

William Wai-Chun Cheng, Clara Sze-Man Tang, Hong-Sheng Gui, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  2. Article
  3. Association betweenTranslational pediatrics · 2022
    Article
  4. Review
  5. Review
  6. Article
  7. Advances in Enteric Neurobiology: The "Brain" in the Gut in Health and Disease.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Review
  8. [Syndromic Hirschsprung′s disease and its mode of inheritance].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2018
    Review
  9. Animal and cellular models of familial dysautonomia.Clinical autonomic research : official journal of the Clinical Autonomic Research Society · 2017
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

William Wai-Chun ChengWilliam Wai-Chun Cheng, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo, Department of Surgery, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong, China.
Clara Sze-Man TangWilliam Wai-Chun Cheng, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo, Department of Surgery, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong, China.
Hong-Sheng GuiWilliam Wai-Chun Cheng, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo, Department of Surgery, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong, China.
Man-Ting SoWilliam Wai-Chun Cheng, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo, Department of Surgery, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong, China.
Vincent Chi-Hang LuiWilliam Wai-Chun Cheng, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo, Department of Surgery, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong, China.
Paul Kwong-Hang TamWilliam Wai-Chun Cheng, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo, Department of Surgery, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong, China.
Maria-Mercè Garcia-BarceloWilliam Wai-Chun Cheng, Man-Ting So, Vincent Chi-Hang Lui, Paul Kwong-Hang Tam, Maria-Mercè Garcia-Barcelo, Department of Surgery, Li Ka Shing Faculty of Medicine, the University of Hong Kong, Hong Kong, China.
Hang Seng University of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo investigate the role of IKBKAP (inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein) in the development of enteric nervous system (ENS) and Hirschsprung disease (HSCR).

methodsIn this study, we injected a morpholino that blocked the translation of ikbkap protein to 1-cell stage zebrafish embryos. The phenotype in the ENS was analysed by antibody staining of the pan-neuronal marker HuC/D followed by enteric neuron counting. The mean numbers of enteric neurons were compared between the morphant and the control. We also studied the expressions of ret and phox2bb, which are involved in ENS development, in the ikbkap morpholino injected embryos by quantitative reverse transcriptase polymerase chain reaction and compared them with the control.

resultsWe observed aganglionosis (χ2, P<0.01) and a reduced number of enteric neurons (38.8±9.9 vs 50.2±17.3, P<0.05) in the zebrafish embryos injected with ikbkap translation-blocking morpholino (morphant) when compared with the control embryos. Specificity of the morpholino was confirmed by similar results obtained using a second non-overlapping morpholino that blocked the translation of ikbkap. We further studied the morphant by analysing the expression levels of genes involved in ENS development such as ret, phox2bb and sox10, and found that phox2bb, the ortholog of human PHOX2B, was significantly down-regulated (0.51±0.15 vs 1.00±0, P<0.05). Although we also observed a reduction in the expression of ret, the difference was not significant.

conclusionLoss of IKBKAP contributed to HSCR as demonstrated by functional analysis in zebrafish embryos.

Indexed as

AnimalsCarrier ProteinsDisease Models, AnimalEnteric Nervous SystemGene Expression Regulation, DevelopmentalGene Knockdown TechniquesGenetic Predisposition to DiseaseHirschsprung DiseaseHomeodomain ProteinsHumansImmunohistochemistryMorpholinosPhenotypeProto-Oncogene Proteins c-retReverse Transcriptase Polymerase Chain ReactionTranscription FactorsCarrier Proteinselp1 protein, zebrafishHomeodomain ProteinsMorpholinosNBPhox proteinProto-Oncogene Proteins c-retRet protein, zebrafishTranscription FactorsZebrafish ProteinsEnteric nervous systemHirschsprung diseaseIKBKAPMorpholinosZebrafish

Identifiers

PMID25717236
PMCPMC4326138
OpenAlexW1875853547

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.