Evidence map›Paper›PMID 25716099›Full record

ReviewSeminars in diagnostic pathology2015

Evolving approach and clinical significance of detecting DNA mismatch repair deficiency in colorectal carcinoma.

Jinru Shia

Open access · greenAbstract readReview
In one paragraph

Review in Seminars in diagnostic pathology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
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  16. Frontiers in genetics · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Jinru ShiaDepartment of Pathology, Memorial Sloan Kettering Cancer Center, 1275 York Ave, New York, New York 10065. Electronic address: Shiaj@mskcc.org.
Memorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Classifying DNA Mismatch Repair Gene Variants of Unknown SignificanceR01CA164944 · NCI · UNIVERSITY OF UTAH · PI GREENBLATT, MARC S, TAVTIGIAN, SEAN VAHRAM · 2013 to 2016
$2.2M
NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA164944NCI NIH HHS R01 CA164944-01A1
6 · The paper itself

Abstract

The last two decades have seen significant advancement in our understanding of colorectal tumors with DNA mismatch repair (MMR) deficiency. The ever-emerging revelations of new molecular and genetic alterations in various clinical conditions have necessitated constant refinement of disease terminology and classification. Thus, a case with the clinical condition of hereditary non-polyposis colorectal cancer as defined by the Amsterdam criteria may be one of Lynch syndrome characterized by a germline defect in one of the several MMR genes, one of the yet-to-be-defined "Lynch-like syndrome" if there is evidence of MMR deficiency in the tumor but no detectable germline MMR defect or tumor MLH1 promoter methylation, or "familial colorectal cancer type X" if there is no evidence of MMR deficiency. The detection of these conditions carries significant clinical implications. The detection tools and strategies are constantly evolving. The Bethesda guidelines symbolize a selective approach that uses clinical information and tumor histology as the basis to select high-risk individuals. Such a selective approach has subsequently been found to have limited sensitivity, and is thus gradually giving way to the alternative universal approach that tests all newly diagnosed colorectal cancers. Notably, the universal approach also has its own limitations; its cost-effectiveness in real practice, in particular, remains to be determined. Meanwhile, technological advances such as the next-generation sequencing are offering the promise of direct genetic testing for MMR deficiency at an affordable cost probably in the near future. This article reviews the up-to-date molecular definitions of the various conditions related to MMR deficiency, and discusses the tools and strategies that have been used in detecting these conditions. Special emphasis will be placed on the evolving nature and the clinical importance of the disease definitions and the detection strategies.

Indexed as

DNA Mismatch RepairMolecular Diagnostic TechniquesAlgorithmsBiomarkers, TumorColorectal Neoplasms, Hereditary NonpolyposisCritical PathwaysDNA Mutational AnalysisGenetic Predisposition to DiseaseHumansImmunohistochemistryMutationPhenotypePredictive Value of TestsBiomarkers, TumorCMMR-DLynch-like syndromeLynch syndromeMicrosatellite instabilityMMR IHCSporadic MSI cancer

Identifiers

PMID25716099
PMCPMC5018830
OpenAlexW2037644751

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.