Evidence map›Paper›PMID 25715102›Full record

ArticleAIDS (London, England)2015

Low SAMHD1 expression following T-cell activation and proliferation renders CD4+ T cells susceptible to HIV-1.

Nicolas Ruffin, Vedran Brezar, Diana Ayinde, Cécile Lefebvre, Julian Schulze Zur Wiesch, Jan van Lunzen, Maximilian Bockhorn, Olivier Schwartz, Hakim Hocini, Jean-Daniel Lelievre and 3 more

Abstract read
In one paragraph

Article in AIDS (London, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
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  13. Peering into the HIV reservoir.Reviews in medical virology · 2018
    Review
  14. Article
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  16. HIV-1 Infection of Primary CD4Journal of virology · 2018
    Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Nicolas RuffinaInserm, U955, Equipe 16 bFaculté de médecine, Université Paris Est cVaccine Research Institute (VRI), Créteil dUnité Virus et Immunité, Département de Virologie, Institut Pasteur, Paris, France eInfectious Diseases Unit, Department of Internal Medicine, University Medical Center, Hamburg-Eppendorf and Heinrich-Pette-Institute, Leibniz Institute for Experimental Virology, Hamburg fGeneral, Visceral and Thoracic Surgery Department, University Medical Center Hamburg, Eppendorf, Germany gAP-HP, Hôpital H. Mondor - A. Chenevier, Service d'immunologie clinique et maladies infectieuses, Créteil, France hThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut, USA.
Vedran Brezar
Diana Ayinde
Cécile Lefebvre
Julian Schulze Zur Wiesch
Jan van Lunzen
Maximilian Bockhorn
Olivier Schwartz
Hakim Hocini
Jean-Daniel Lelievre
Jacques Banchereau
Yves Levy
Nabila Seddiki
Institut de Recherche Vaccinale · FRInstitut Pasteur · FRUniversität Hamburg · DEGTx (United States) · USInserm · FRLeibniz Institute of Virology (LIV) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesHIV-1 replication depends on the state of cell activation and division. It is established that SAMHD1 restricts HIV-1 infection of resting CD4 T cells. The modulation of SAMHD1 expression during T-cell activation and proliferation, however, remains unclear, as well as a role for SAMHD1 during HIV-1 pathogenesis.

methodsSAMHD1 expression was assessed in CD4 T cells after their activation and in-vitro HIV-1 infection. We performed phenotype analyzes using flow cytometry on CD4 T cells from peripheral blood and lymph nodes from cohorts of HIV-1-infected individuals under antiretroviral treatment or not, and controls.

resultsWe show that SAMHD1 expression decreased during CD4 T-cell proliferation in association with an increased susceptibility to in-vitro HIV-1 infection. Additionally, circulating memory CD4 T cells are enriched in cells with low levels of SAMHD1. These SAMHD1 cells are highly differentiated, exhibit a large proportion of Ki67 cycling cells and are enriched in T-helper 17 cells. Importantly, memory SAMHD1 cells were depleted from peripheral blood of HIV-infected individuals. We also found that follicular helper T cells present in secondary lymphoid organs lacked the expression of SAMHD1, which was accompanied by a higher susceptibility to HIV-1 infection in vitro.

conclusionWe demonstrate that SAMHD1 expression is decreased during CD4 T-cell activation and proliferation. Also, CD4 T-cell subsets known to be more susceptible to HIV-1 infection, for example, T-helper 17 and follicular helper T cells, display lower levels of SAMHD1. These results pin point a role for SAMHD1 expression in HIV-1 infection and the concomitant depletion of CD4 T cells.

Indexed as

Cell ProliferationLymphocyte ActivationAdolescentAdultAgedBloodCD4-Positive T-LymphocytesChildFemaleFlow CytometryGene ExpressionHIV-1HumansImmunophenotypingLymph NodesMaleMonomeric GTP-Binding ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, human

Identifiers

PMID25715102
PMCPMC4342413
OpenAlexW2333804036

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.