Evidence map›Paper›PMID 25713412›Full record

ArticleThe Journal of cell biology2015

Three distinct ribosome assemblies modulated by translation are the building blocks of polysomes.

Gabriella Viero, Lorenzo Lunelli, Andrea Passerini, Paolo Bianchini, Robert J Gilbert, Paola Bernabò, Toma Tebaldi, Alberto Diaspro, Cecilia Pederzolli, Alessandro Quattrone

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
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  8. Review
  9. Stochastic microswimming model of ribosome motion on the polysome.The European physical journal. E, Soft matter · 2021
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  10. Review
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  20. Peering at Brain Polysomes with Atomic Force Microscopy.Journal of visualized experiments : JoVE · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Gabriella VieroInstitute of Biophysics, National Research Council (CNR) Unit at Trento, 38123 Povo, Italy Laboratory of Translational Genomics, Centre for Integrative Biology, University of Trento, 38123 Mattarello, Italy gabriella.viero@cnr.it alessandro.quattrone@unit.it.
Lorenzo LunelliLaboratory of Biomolecular Sequence and Structure Analysis for Health, Fondazione Bruno Kessler, 38123 Povo, Italy.
Andrea PasseriniDepartment of Information Engineering and Computer Science, University of Trento, 38123 Povo, Italy.
Paolo BianchiniNanophysics Department, Italian Institute of Technology, 16163 Genova, Italy.
Robert J GilbertDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, England, UK.
Paola BernabòInstitute of Biophysics, National Research Council (CNR) Unit at Trento, 38123 Povo, Italy.
Toma TebaldiLaboratory of Translational Genomics, Centre for Integrative Biology, University of Trento, 38123 Mattarello, Italy.
Alberto DiasproNanophysics Department, Italian Institute of Technology, 16163 Genova, Italy.
Cecilia PederzolliLaboratory of Biomolecular Sequence and Structure Analysis for Health, Fondazione Bruno Kessler, 38123 Povo, Italy.
Alessandro QuattroneLaboratory of Translational Genomics, Centre for Integrative Biology, University of Trento, 38123 Mattarello, Italy gabriella.viero@cnr.it alessandro.quattrone@unit.it.
University of Trento · ITFondazione Bruno Kessler · ITItalian Institute of Technology · ITNational Research Council · ITUniversity of Oxford · GB

Funding

Wellcome Trust 090532/Z/09/Z
6 · The paper itself

Abstract

Translation is increasingly recognized as a central control layer of gene expression in eukaryotic cells. The overall organization of mRNA and ribosomes within polysomes, as well as the possible role of this organization in translation are poorly understood. Here we show that polysomes are primarily formed by three distinct classes of ribosome assemblies. We observe that these assemblies can be connected by naked RNA regions of the transcript. We show that the relative proportions of the three classes of ribosome assemblies reflect, and probably dictate, the level of translational activity. These results reveal the existence of recurrent supra-ribosomal building blocks forming polysomes and suggest the presence of unexplored translational controls embedded in the polysome structure.

Indexed as

Cell Line, TumorHumansPolyribosomesProtein BiosynthesisRNA, MessengerRNA, Messenger

Identifiers

PMID25713412
PMCPMC4347638
OpenAlexW2144444443

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.