Evidence map›Paper›PMID 25713354›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Initial viral load determines the magnitude of the human CD8 T cell response to yellow fever vaccination.

Rama S Akondy, Philip L F Johnson, Helder I Nakaya, Srilatha Edupuganti, Mark J Mulligan, Benton Lawson, Joseph D Miller, Bali Pulendran, Rustom Antia, Rafi Ahmed

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed.

  1. Trial
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  10. Regulation of CD45 isoforms during human effector and memory CD8 T cell differentiation: Implications for T cell nomenclature.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Human T Cell Responses to Flavivirus Vaccines.European journal of immunology · 2025
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Review
  19. Article
  20. Review

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Rama S AkondyEmory Vaccine Center, Department of Microbiology and Immunology.
Philip L F JohnsonDepartment of Biology and.
Helder I NakayaEmory Vaccine Center, Department of Pathology and Laboratory Medicine, and Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of Sao Paulo, 05508 Sao Paulo, Brazil.
Srilatha EdupugantiEmory Vaccine Center, Division of Infectious Disease, Department of Medicine, Emory University School of Medicine, Atlanta, GA 30322;
Mark J MulliganEmory Vaccine Center, Division of Infectious Disease, Department of Medicine, Emory University School of Medicine, Atlanta, GA 30322;
Benton LawsonYerkes National Primate Research Center, Emory University, Atlanta, GA 30322; and.
Joseph D MillerEmory Vaccine Center.
Bali PulendranEmory Vaccine Center, Department of Pathology and Laboratory Medicine, and.
Rustom AntiaDepartment of Biology and rahmed@emory.edu rantia@emory.edu.
Rafi AhmedEmory Vaccine Center, Department of Microbiology and Immunology, rahmed@emory.edu rantia@emory.edu.

Funding

VACCINE INDUCED IMMUNITY IN THE YOUNG AND AGEDU19AI057266 · NIAID · EMORY UNIVERSITY · PI Rafi Ahmed · 2003 to 2026
$81.7M
Understanding the Role of Mucosal Antigen Presenting Cells in Regulating Immune ResponseR37AI048638 · NIAID · STANFORD UNIVERSITY · PI PULENDRAN, BALI · 2009 to 2018
$4.0M
QUANTIFYING THE BALANCE BETWEEN VACCINE-INDUCED T CELL PROTECTION AND PATHOLOGYR01AI110720 · NIAID · EMORY UNIVERSITY · PI ANTIA, RUSTOM NOSHIR · 2014 to 2018
$2.0M
Population genetic inference from the adaptive immune systemR00GM104158 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI JOHNSON, PHILIP LEE FALK · 2015 to 2017
$747k
Population genetic inference from the adaptive immune systemK99GM104158 · NIGMS · EMORY UNIVERSITY · PI JOHNSON, PHILIP LEE FALK · 2013 to 2014
$179k
NIAID NIH HHS R01 AI110720NIAID NIH HHS R01AI110720NIAID NIH HHS R37 AI048638NIAID NIH HHS U19 AI057266NIAID NIH HHS U19AI057266NIGMS NIH HHS K99 GM104158NIGMS NIH HHS R00 GM104158
6 · The paper itself

Abstract

CD8 T cells are a potent tool for eliminating intracellular pathogens and tumor cells. Thus, eliciting robust CD8 T-cell immunity is the basis for many vaccines under development. However, the relationship between antigen load and the magnitude of the CD8 T-cell response is not well-described in a human immune response. Here we address this issue by quantifying viral load and the CD8 T-cell response in a cohort of 80 individuals immunized with the live attenuated yellow fever vaccine (YFV-17D) by sampling peripheral blood at days 0, 1, 2, 3, 5, 7, 9, 11, 14, 30, and 90. When the virus load was below a threshold (peak virus load < 225 genomes per mL, or integrated virus load < 400 genome days per mL), the magnitude of the CD8 T-cell response correlated strongly with the virus load (R(2) ∼ 0.63). As the virus load increased above this threshold, the magnitude of the CD8 T-cell responses saturated. Recent advances in CD8 T-cell-based vaccines have focused on replication-incompetent or single-cycle vectors. However, these approaches deliver relatively limited amounts of antigen after immunization. Our results highlight the requirement that T-cell-based vaccines should deliver sufficient antigen during the initial period of the immune response to elicit a large number of CD8 T cells that may be needed for protection.

Indexed as

Viral LoadCD8-Positive T-LymphocytesCohort StudiesGene Expression ProfilingHumansYellow Fever VaccineYellow fever virusYellow Fever Vaccineeffector T cellshuman CD8 T cellsimmune memoryvaccinesviral load

Identifiers

PMID25713354
PMCPMC4364194

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.