Evidence map›Paper›PMID 25712885›Full record

ArticleEnvironmental science and pollution research international2015

Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia.

Robert Duran, Ana Bielen, Tina Paradžik, Claire Gassie, Emina Pustijanac, Christine Cagnon, Bojan Hamer, Dušica Vujaklija

Abstract read
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In one paragraph

Article in Environmental science and pollution research international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. ExploringAntibiotics (Basel, Switzerland) · 2026
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  16. Integron diversity in marine environments.Environmental science and pollution research international · 2015
    Review
  17. Microbial ecology of hydrocarbon-polluted coastal sediments.Environmental science and pollution research international · 2015
    Article
  18. Article
  19. Effect of sulfonylurea tribenuron methyl herbicide on soil Actinobacteria growth and characterization of resistant strains.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Robert DuranEquipe Environnement et Microbiologie, MELODY group, Université de Pau et des Pays de l'Adour, IPREM UMR CNRS 5254, BP 1155, 64013, Pau Cedex, France. robert.duran@univ-pau.fr.
Ana BielenDivision of Molecular Biology, Institute Ruđer Bošković, Bijenička 54, 10000, Zagreb, Croatia.
Tina ParadžikDivision of Molecular Biology, Institute Ruđer Bošković, Bijenička 54, 10000, Zagreb, Croatia.
Claire GassieEquipe Environnement et Microbiologie, MELODY group, Université de Pau et des Pays de l'Adour, IPREM UMR CNRS 5254, BP 1155, 64013, Pau Cedex, France.
Emina PustijanacJuraj Dobrila University of Pula, Zagrebačka 30, 52100, Pula, Croatia.
Christine CagnonEquipe Environnement et Microbiologie, MELODY group, Université de Pau et des Pays de l'Adour, IPREM UMR CNRS 5254, BP 1155, 64013, Pau Cedex, France.
Bojan HamerCenter for Marine Research, Ruđer Bošković Institute, Giordano Paliaga 5, 52210, Rovinj, Croatia.
Dušica VujaklijaDivision of Molecular Biology, Institute Ruđer Bošković, Bijenička 54, 10000, Zagreb, Croatia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a "core" Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems.

Indexed as

ActinobacteriaArsenicCroatiaEnvironmental MonitoringGeologic SedimentsMetals, HeavyPolycyclic Aromatic HydrocarbonsWater Pollutants, ChemicalArsenicMetals, HeavyPolycyclic Aromatic HydrocarbonsWater Pollutants, ChemicalActinobacteriaBacteria diversityCommunity structureCo-occurrence networkHydrocarbon contaminationMarine coastal sedimentsMetal contaminationT-RFLP

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.