Evidence map›Paper›PMID 25712042›Full record

ArticleAnalytical biochemistry2015

A high-throughput mass spectrometric assay for discovery of human lipoxygenase inhibitors and allosteric effectors.

J Brian Jameson, Victor Kenyon, Theodore R Holman

Abstract read
In one paragraph

Article in Analytical biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. NOInternational journal of molecular sciences · 2021
    Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

J Brian JamesonDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Victor KenyonDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Theodore R HolmanDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, CA 95064, USA. Electronic address: tholman@chemistry.ucsc.edu.
University of California, Santa Cruz · US

Funding

Functional and Inhibitory Studies of Human LipoxygenaseR01GM056062 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI HOLMAN, THEODORE R · 2002 to 2012
$3.1M
THERMO ELECTRON LTQ-FT MASS SPECTROMETERS10RR020939 · NCRR · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI HOLMAN, THEODORE R · 2006 to 2006
$368k
FUNCTIONAL STUDIES OF HUMAN AND SOYBEAN LIPOXYGENASER29GM056062 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI HOLMAN, THEODORE R · 1997 to 2001
$206k
NCRR NIH HHS S10 RR020939NCRR NIH HHS S10-RR20939NIGMS NIH HHS GM56062NIGMS NIH HHS R01 GM056062NIGMS NIH HHS R29 GM056062
6 · The paper itself

Abstract

Lipoxygenases (LOXs) regulate inflammation through the production of a variety of molecules whose specific downstream effects are not entirely understood due to the complexity of the inflammation pathway. The generation of these biomolecules can potentially be inhibited and/or allosterically regulated by small synthetic molecules. The current work describes the first mass spectrometric high-throughput method for identifying small molecule LOX inhibitors and LOX allosteric effectors that change the substrate preference of human lipoxygenase enzymes. Using a volatile buffer and an acid-labile detergent, enzymatic products can be directly detected using high-performance liquid chromatography-mass spectrometry (HPLC-MS) without the need for organic extraction. The method also reduces the required enzyme concentration compared with traditional ultraviolet (UV) absorbance methods by approximately 30-fold, allowing accurate binding affinity measurements for inhibitors with nanomolar affinity. The procedure was validated using known LOX inhibitors and the allosteric effector 13(S)-hydroxy-9Z,11E-octadecadienoic acid (13-HODE).

Indexed as

Chromatography, High Pressure LiquidHumansLinoleic AcidsLipoxygenase InhibitorsMass SpectrometryMolecular StructureSubstrate Specificity13-hydroxy-9,11-octadecadienoic acidLinoleic AcidsLipoxygenase InhibitorsAllosteryHigh-throughput assayHuman 15-lipoxygenase-1Human 15-lipoxygenase-2InhibitorMass spectroscopy

Identifiers

PMID25712042
PMCPMC4398643
OpenAlexW2091807789

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.