Evidence map›Paper›PMID 25711127›Full record

ArticleTraffic (Copenhagen, Denmark)2015

Improved Plasmids for Fluorescent Protein Tagging of Microtubules in Saccharomyces cerevisiae.

Steven M Markus, Safia Omer, Kaitlyn Baranowski, Wei-Lih Lee

Abstract read
In one paragraph

Article in Traffic (Copenhagen, Denmark), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Determination of Anaphase Duration by Time-Lapse Microscopy in Budding Yeast.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  7. Article
  8. Spindle architecture constrains karyotype in budding yeast.bioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Using Budding Yeast as a Model to Understand Dynein-Mediated Cargo Transport.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Steven M Markus *Biology Department, University of Massachusetts Amherst, 221 Morrill South, 611 North Pleasant Street, Amherst, MA 01003.
Safia Omer *
Kaitlyn BaranowskiBiology Department, University of Massachusetts Amherst, 221 Morrill South, 611 North Pleasant Street, Amherst, MA 01003.
Wei-Lih LeeBiology Department, University of Massachusetts Amherst, 221 Morrill South, 611 North Pleasant Street, Amherst, MA 01003.
University of Massachusetts Amherst · US

Funding

Mechanism of Dynein-Mediated Spindle PositioningR01GM076094 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI LEE, WEI-LIH · 2007 to 2016
$3.1M
Cellular Engineering Biotechnology Training ProgramT32GM108556 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI HARDY, JEANNE ANN, PEYTON, SHELLY R. · 2015 to 2019
$766k
NIGMS NIH HHS 1R01GM076094NIGMS NIH HHS R01 GM076094NIGMS NIH HHS T32 GM108556
6 · The paper itself

Abstract

The ability to fluorescently label microtubules in live cells has enabled numerous studies of motile and mitotic processes. Such studies are particularly useful in budding yeast owing to the ease with which they can be genetically manipulated and imaged by live cell fluorescence microscopy. Because of problems associated with fusing genes encoding fluorescent proteins (FPs) to the native α-tubulin (TUB1) gene, the FP-Tub1 fusion is generally integrated into the genome such that the endogenous TUB1 locus is left intact. Although such modifications have no apparent consequences on cell viability, it is unknown if these genome-integrated FP-tubulin fusions negatively affect microtubule functions. Thus, a simple, economical and highly sensitive assay of microtubule function is required. Furthermore, the current plasmids available for generation of FP-Tub1 fusions have not kept pace with the development of improved FPs. Here, we have developed a simple and sensitive assay of microtubule function that is sufficient to identify microtubule defects that were not apparent by fluorescence microscopy or cell growth assays. Using results obtained from this assay, we have engineered a new family of 30 FP-Tub1 plasmids that use various improved FPs and numerous selectable markers that upon genome integration have no apparent defect on microtubule function.

Indexed as

Genetic VectorsLuminescent ProteinsMicrotubulesPlasmidsProtein EngineeringProtein TransportRecombinant ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsLuminescent ProteinsRecombinant ProteinsSaccharomyces cerevisiae ProteinsTub1 protein, S cerevisiaeBik1Bim1budding yeastfluorescent proteinsmicrotubulesTub1tubulin

Identifiers

PMID25711127
PMCPMC4795465
OpenAlexW1591231024

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.