Evidence map›Paper›PMID 25710462›Full record

ArticlePLoS pathogens2015

Super-resolution imaging of ESCRT-proteins at HIV-1 assembly sites.

Jens Prescher, Viola Baumgärtel, Sergey Ivanchenko, Adriano A Torrano, Christoph Bräuchle, Barbara Müller, Don C Lamb

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 99 citations in OpenAlex.

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  8. Virotrap: Trapping Protein Complexes in Virus-Like Particles.Methods in molecular biology (Clifton, N.J.) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Jens PrescherPhysical Chemistry, Department of Chemistry, Nanosystem Initiative Munich (NIM), Center for Integrated Protein Science Munich (CiPSM) and Center for NanoScience (CeNS), Ludwig-Maximilians-Universität München, Munich, Germany.
Viola BaumgärtelPhysical Chemistry, Department of Chemistry, Nanosystem Initiative Munich (NIM), Center for Integrated Protein Science Munich (CiPSM) and Center for NanoScience (CeNS), Ludwig-Maximilians-Universität München, Munich, Germany.
Sergey IvanchenkoPhysical Chemistry, Department of Chemistry, Nanosystem Initiative Munich (NIM), Center for Integrated Protein Science Munich (CiPSM) and Center for NanoScience (CeNS), Ludwig-Maximilians-Universität München, Munich, Germany.
Adriano A TorranoPhysical Chemistry, Department of Chemistry, Nanosystem Initiative Munich (NIM), Center for Integrated Protein Science Munich (CiPSM) and Center for NanoScience (CeNS), Ludwig-Maximilians-Universität München, Munich, Germany.
Christoph BräuchlePhysical Chemistry, Department of Chemistry, Nanosystem Initiative Munich (NIM), Center for Integrated Protein Science Munich (CiPSM) and Center for NanoScience (CeNS), Ludwig-Maximilians-Universität München, Munich, Germany.
Barbara MüllerDepartment of Infectious Diseases, Virology, Universitätsklinikum Heidelberg, Heidelberg, Germany.
Don C LambPhysical Chemistry, Department of Chemistry, Nanosystem Initiative Munich (NIM), Center for Integrated Protein Science Munich (CiPSM) and Center for NanoScience (CeNS), Ludwig-Maximilians-Universität München, Munich, Germany.
Center for NanoScience · DELudwig-Maximilians-Universität München · DECenter for Integrated Protein Science Munich · DEUniversity Hospital Heidelberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cellular endosomal sorting complex required for transport (ESCRT) machinery is involved in membrane budding processes, such as multivesicular biogenesis and cytokinesis. In HIV-infected cells, HIV-1 hijacks the ESCRT machinery to drive HIV release. Early in the HIV-1 assembly process, the ESCRT-I protein Tsg101 and the ESCRT-related protein ALIX are recruited to the assembly site. Further downstream, components such as the ESCRT-III proteins CHMP4 and CHMP2 form transient membrane associated lattices, which are involved in virus-host membrane fission. Although various geometries of ESCRT-III assemblies could be observed, the actual membrane constriction and fission mechanism is not fully understood. Fission might be driven from inside the HIV-1 budding neck by narrowing the membranes from the outside by larger lattices surrounding the neck, or from within the bud. Here, we use super-resolution fluorescence microscopy to elucidate the size and structure of the ESCRT components Tsg101, ALIX, CHMP4B and CHMP2A during HIV-1 budding below the diffraction limit. To avoid the deleterious effects of using fusion proteins attached to ESCRT components, we performed measurements on the endogenous protein or, in the case of CHMP4B, constructs modified with the small HA tag. Due to the transient nature of the ESCRT interactions, the fraction of HIV-1 assembly sites with colocalizing ESCRT complexes was low (1.5%-3.4%). All colocalizing ESCRT clusters exhibited closed, circular structures with an average size (full-width at half-maximum) between 45 and 60 nm or a diameter (determined using a Ripley's L-function analysis) of roughly 60 to 100 nm. The size distributions for colocalizing clusters were narrower than for non-colocalizing clusters, and significantly smaller than the HIV-1 bud. Hence, our results support a membrane scission process driven by ESCRT protein assemblies inside a confined structure, such as the bud neck, rather than by large lattices around the neck or in the bud lumen. In the case of ALIX, a cloud of individual molecules surrounding the central clusters was often observed, which we attribute to ALIX molecules incorporated into the nascent HIV-1 Gag shell. Experiments performed using YFP-tagged Tsg101 led to an over 10-fold increase in ESCRT structures colocalizing with HIV-1 budding sites indicating an influence of the fusion protein tag on the function of the ESCRT protein.

Indexed as

Calcium-Binding ProteinsCell Cycle ProteinsCell Line, TumorDNA-Binding ProteinsEndosomal Sorting Complexes Required for TransportHeLa CellsHIV-1HIV InfectionsHumansImage EnhancementMicroscopy, FluorescenceProtein BindingProtein MultimerizationStaining and LabelingTranscription FactorsTsg101 ProteinCalcium-Binding ProteinsCell Cycle ProteinsCHMP2A protein, humanCHMP4B protein, humanDNA-Binding ProteinsEndosomal Sorting Complexes Required for TransportPDCD6IP protein, humanTranscription FactorsTsg101 Protein

Identifiers

PMID25710462
PMCPMC4339578
OpenAlexW2072238256

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.