Evidence map›Paper›PMID 25710176›Full record

ArticlePloS one2015

Synergistic and antagonistic interplay between myostatin gene expression and physical activity levels on gene expression patterns in triceps Brachii muscles of C57/BL6 mice.

Kelsey Caetano-Anollés, Sanjibita Mishra, Sandra L Rodriguez-Zas

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  5. Methyltransferase-like 21e inhibits 26S proteasome activity to facilitate hypertrophy of type IIb myofibers.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Kelsey Caetano-AnollésDepartment of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America.
Sanjibita MishraDepartment of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America; Khorana Scholars Program, Indo-US Science and Technology Forum, New Delhi, India; National Institute of Technology, Rourkel, India.
Sandra L Rodriguez-ZasDepartment of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America; Department of Statistics, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America; Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America.
University of Illinois Urbana-Champaign · USNational Institute of Technology Rourkela · IN

Funding

Integration of resources and studies to elucidate neuropeptide signalingR21DA027548 · NIDA · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI RODRIGUEZ ZAS, SANDRA L · 2009 to 2012
$961k
Inflammation-Induced Behavioral Alterations: A Psychogenomic ApproachR21MH096030 · NIMH · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI RODRIGUEZ ZAS, SANDRA L · 2012 to 2013
$430k
NIDA NIH HHS R21 DA027548NIMH NIH HHS R21 MH096030
6 · The paper itself

Abstract

Levels of myostatin expression and physical activity have both been associated with transcriptome dysregulation and skeletal muscle hypertrophy. The transcriptome of triceps brachii muscles from male C57/BL6 mice corresponding to two genotypes (wild-type and myostatin-reduced) under two conditions (high and low physical activity) was characterized using RNA-Seq. Synergistic and antagonistic interaction and ortholog modes of action of myostatin genotype and activity level on genes and gene pathways in this skeletal muscle were uncovered; 1,836, 238, and 399 genes exhibited significant (FDR-adjusted P-value < 0.005) activity-by-genotype interaction, genotype and activity effects, respectively. The most common differentially expressed profiles were (i) inactive myostatin-reduced relative to active and inactive wild-type, (ii) inactive myostatin-reduced and active wild-type, and (iii) inactive myostatin-reduced and inactive wild-type. Several remarkable genes and gene pathways were identified. The expression profile of nascent polypeptide-associated complex alpha subunit (Naca) supports a synergistic interaction between activity level and myostatin genotype, while Gremlin 2 (Grem2) displayed an antagonistic interaction. Comparison between activity levels revealed expression changes in genes encoding for structural proteins important for muscle function (including troponin, tropomyosin and myoglobin) and for fatty acid metabolism (some linked to diabetes and obesity, DNA-repair, stem cell renewal, and various forms of cancer). Conversely, comparison between genotype groups revealed changes in genes associated with G1-to-S-phase transition of the cell cycle of myoblasts and the expression of Grem2 proteins that modulate the cleavage of the myostatin propeptide. A number of myostatin-feedback regulated gene products that are primarily regulatory were uncovered, including microRNA impacting central functions and Piezo proteins that make cationic current-controlling mechanosensitive ion channels. These important findings extend hypotheses of myostatin and physical activity master regulation of genes and gene pathways, impacting medical practices and therapies associated with muscle atrophy in humans and companion animal species and genome-enabled selection practices applied to food-production animal species.

Indexed as

Physical ExertionTranscriptomeAnimalsCytokinesIon ChannelsMaleMiceMice, Inbred C57BLMolecular ChaperonesMuscle, SkeletalMyostatinProteinsRNA, MessengerCytokinesGrem2 protein, mouseIon ChannelsMolecular ChaperonesMyostatinnascent-polypeptide-associated complexPiezo1 protein, mouseProteinsRNA, Messenger

Identifiers

PMID25710176
PMCPMC4339580
OpenAlexW2075689527

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.