Evidence map›Paper›PMID 25710168›Full record

ArticlePLoS genetics2015

acal is a long non-coding RNA in JNK signaling in epithelial shape changes during drosophila dorsal closure.

Luis Daniel Ríos-Barrera, Irene Gutiérrez-Pérez, María Domínguez, Juan Rafael Riesgo-Escovar

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Genomic and functional conservation of lncRNAs: lessons from flies.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  7. Frontiers in immunology · 2022
    Article
  8. International journal of molecular sciences · 2021
    Article
  9. Long Non-Coding RNAs in Insects.Animals : an open access journal from MDPI · 2021
    Review
  10. Article
  11. Insights into the Functions of LncRNAs inInternational journal of molecular sciences · 2019
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Luis Daniel Ríos-BarreraInstituto de Neurobiología, Universidad Nacional Autónoma de México, campus UNAM Juriquilla, Querétaro, México.
Irene Gutiérrez-PérezInstituto de Neurociencias, Universidad Miguel Hernández-CSIC, Campus de San Juan, Sant Joan d'Alacant, Alicante, España.
María DomínguezInstituto de Neurociencias, Universidad Miguel Hernández-CSIC, Campus de San Juan, Sant Joan d'Alacant, Alicante, España.
Juan Rafael Riesgo-EscovarInstituto de Neurobiología, Universidad Nacional Autónoma de México, campus UNAM Juriquilla, Querétaro, México.
Universidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dorsal closure is an epithelial remodeling process taking place during Drosophila embryogenesis. JNK signaling coordinates dorsal closure. We identify and characterize acal as a novel negative dorsal closure regulator. acal represents a new level of JNK regulation. The acal locus codes for a conserved, long, non-coding, nuclear RNA. Long non-coding RNAs are an abundant and diverse class of gene regulators. Mutations in acal are lethal. acal mRNA expression is dynamic and is processed into a collection of 50 to 120 bp fragments. We show that acal lies downstream of raw, a pioneer protein, helping explain part of raw functions, and interacts genetically with Polycomb. acal functions in trans regulating mRNA expression of two genes involved in JNK signaling and dorsal closure: Connector of kinase to AP1 (Cka) and anterior open (aop). Cka is a conserved scaffold protein that brings together JNK and Jun, and aop is a transcription factor. Misregulation of Cka and aop can account for dorsal closure phenotypes in acal mutants.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsBody PatterningDrosophila melanogasterDrosophila ProteinsEpithelial CellsEye ProteinsGene Expression Regulation, DevelopmentalMAP Kinase Signaling SystemMutationPhenotypePolycomb-Group ProteinsRepressor ProteinsRNA, Long NoncodingSignal Transductionacal long non-coding RNA, DrosophilaAdaptor Proteins, Signal TransducingAOP protein, DrosophilaCka protein, DrosophilaDrosophila ProteinsEye ProteinsPolycomb-Group ProteinsRepressor ProteinsRNA, Long Noncoding

Identifiers

PMID25710168
PMCPMC4339196
OpenAlexW1986389909

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.