Evidence map›Paper›PMID 25708000›Full record

ArticleScientific reports2015

Molecular basis for convergent evolution of glutamate recognition by pentameric ligand-gated ion channels.

Timothy Lynagh, Robin N Beech, Maryline J Lalande, Kevin Keller, Brett A Cromer, Adrian J Wolstenholme, Bodo Laube

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

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  12. Complex Homology and the Evolution of Nervous Systems.Trends in ecology & evolution · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Timothy LynaghNeurophysiology and Neurosensory Systems, Technical University of Darmstadt, Darmstadt 64287, Germany.
Robin N BeechInstitute of Parasitology, McGill University, Macdonald Campus, St Anne-de-Bellevue, QC, Canada.
Maryline J LalandeNeurophysiology and Neurosensory Systems, Technical University of Darmstadt, Darmstadt 64287, Germany.
Kevin KellerNeurophysiology and Neurosensory Systems, Technical University of Darmstadt, Darmstadt 64287, Germany.
Brett A CromerHealth Innovations Research Institute, School of Medical Sciences, RMIT University, Bundoora, VIC, Australia.
Adrian J WolstenholmeDepartment of Infectious Diseases and Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, GA, USA.
Bodo LaubeNeurophysiology and Neurosensory Systems, Technical University of Darmstadt, Darmstadt 64287, Germany.
Technical University of Darmstadt · DEMcGill University · CARMIT University · AUUniversity of Georgia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutamate is an indispensable neurotransmitter, triggering postsynaptic signals upon recognition by postsynaptic receptors. We questioned the phylogenetic position and the molecular details of when and where glutamate recognition arose in the glutamate-gated chloride channels. Experiments revealed that glutamate recognition requires an arginine residue in the base of the binding site, which originated at least three distinct times according to phylogenetic analysis. Most remarkably, the arginine emerged on the principal face of the binding site in the Lophotrochozoan lineage, but 65 amino acids upstream, on the complementary face, in the Ecdysozoan lineage. This combined experimental and computational approach throws new light on the evolution of synaptic signalling.

Indexed as

Amino Acid SequenceAnimalsArginineBinding SitesChloride ChannelsEvolution, MolecularGlutamic AcidHumansMolecular Dynamics SimulationMolecular Sequence DataMutagenesis, Site-DirectedPhylogenyProtein Structure, TertiarySequence AlignmentSequence Homology, Amino AcidArginineChloride Channelsglutamate-gated chloride channelsGlutamic Acid

Identifiers

PMID25708000
PMCPMC4338433
OpenAlexW2005836031

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.