Evidence map›Paper›PMID 25706875›Full record

ArticleNature medicine2015

Modeling colorectal cancer using CRISPR-Cas9-mediated engineering of human intestinal organoids.

Mami Matano, Shoichi Date, Mariko Shimokawa, Ai Takano, Masayuki Fujii, Yuki Ohta, Toshiaki Watanabe, Takanori Kanai, Toshiro Sato

Abstract read
PubMed Publisher
In one paragraph

Article in Nature medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 625 papers.

0numbers the graph read from it
0cells of the map it votes in
625citing papers in PubMed
37.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

625 citing papers in PubMed, 1,103 citations in OpenAlex.

  1. Review
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  4. Article
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  7. Review
  8. Recent advancements and limitations of intestinal organoids for clinical applications.Progress in biomedical engineering (Bristol, England) · 2026
    Review
  9. New developments and applications of human organoids.Nature reviews. Molecular cell biology · 2026
    Review
  10. Review
  11. Organoid technology in cancer research.Molecular biomedicine · 2026
    Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
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565 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Mami MatanoDepartment of Gastroenterology, Keio University School of Medicine, Tokyo, Japan.
Shoichi Date1] Department of Gastroenterology, Keio University School of Medicine, Tokyo, Japan. [2] Fujii Memorial Research Institute, Otsuka Pharmaceutical Co., Ltd., Shiga, Japan.
Mariko ShimokawaDepartment of Gastroenterology, Keio University School of Medicine, Tokyo, Japan.
Ai TakanoDepartment of Gastroenterology, Keio University School of Medicine, Tokyo, Japan.
Masayuki Fujii1] Department of Gastroenterology, Keio University School of Medicine, Tokyo, Japan. [2] Department of Surgical Oncology, The University of Tokyo, Tokyo, Japan.
Yuki OhtaDepartment of Gastroenterology, Keio University School of Medicine, Tokyo, Japan.
Toshiaki WatanabeDepartment of Surgical Oncology, The University of Tokyo, Tokyo, Japan.
Takanori KanaiDepartment of Gastroenterology, Keio University School of Medicine, Tokyo, Japan.
Toshiro SatoDepartment of Gastroenterology, Keio University School of Medicine, Tokyo, Japan.
Keio University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human colorectal tumors bear recurrent mutations in genes encoding proteins operative in the WNT, MAPK, TGF-β, TP53 and PI3K pathways. Although these pathways influence intestinal stem cell niche signaling, the extent to which mutations in these pathways contribute to human colorectal carcinogenesis remains unclear. Here we use the CRISPR-Cas9 genome-editing system to introduce multiple such mutations into organoids derived from normal human intestinal epithelium. By modulating the culture conditions to mimic that of the intestinal niche, we selected isogenic organoids harboring mutations in the tumor suppressor genes APC, SMAD4 and TP53, and in the oncogenes KRAS and/or PIK3CA. Organoids engineered to express all five mutations grew independently of niche factors in vitro, and they formed tumors after implantation under the kidney subcapsule in mice. Although they formed micrometastases containing dormant tumor-initiating cells after injection into the spleen of mice, they failed to colonize in the liver. In contrast, engineered organoids derived from chromosome-instable human adenomas formed macrometastatic colonies. These results suggest that 'driver' pathway mutations enable stem cell maintenance in the hostile tumor microenvironment, but that additional molecular lesions are required for invasive behavior.

Indexed as

Gene Expression Regulation, NeoplasticIntestinal MucosaOrganoidsAdenocarcinomaAdenomaAnimalsClass I Phosphatidylinositol 3-KinasesClustered Regularly Interspaced Short Palindromic RepeatsColorectal NeoplasmsGenes, APCGenes, p53Genes, rasHumansIn Vitro TechniquesMiceMutationClass I Phosphatidylinositol 3-KinasesPhosphatidylinositol 3-KinasesPIK3CA protein, humanSmad4 ProteinSMAD4 protein, human

Identifiers

PMID25706875
OpenAlexW1988075836

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.