Evidence map›Paper›PMID 25706805›Full record

ArticlePloS one2015

Novel GATA6 mutations in patients with pancreatic agenesis and congenital heart malformations.

Christina S Chao, Kristen D McKnight, Kenneth L Cox, Anne L Chang, Seung K Kim, Brian J Feldman

Open access · goldAbstract readCase Reports
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Modelling human diabetesFrontiers in endocrinology · 2024
    Review
  7. Article
  8. Review
  9. eLife · 2020
    Article
  10. Article
  11. Review
  12. Article
  13. Partial agenesis of dorsal pancreas. Report of two cases.International journal of surgery case reports · 2020
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Christina S ChaoDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, United States of America.
Kristen D McKnightDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, United States of America.
Kenneth L CoxDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, United States of America.
Anne L ChangDepartment of Dermatology, Stanford University School of Medicine, Stanford, CA, United States of America.
Seung K KimDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA, United States of America; Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA, United States of America.
Brian J FeldmanDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, United States of America; Cardiovascular Institute, Stanford University School of Medicine, Stanford, CA, United States of America; Program in Regenerative Medicine, Stanford University School of Medicine, Stanford, CA, United States of America.
Stanford University · USCardiovascular Institute of the South · US

Funding

Spectrum Stanford Center for clinical and Translational Research and EducationUL1TR001085 · NCATS · STANFORD UNIVERSITY · PI CULLEN, MARK RICHARD, GREENBERG, HARRY BERNARD · 2013 to 2017
$37.1M
Diabetes, Endocrinology and Metabolism Training GrantT32DK007217 · NIDDK · STANFORD UNIVERSITY · PI Justin Pierce Annes, David Matthew Maahs · 1987 to 2026
$7.2M
Stanford Center for Clinical and Translational Education and Research (SCCTER)UL1UL1TR000093 · NCATS · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2012 to 2013
$6.5M
NCATS NIH HHS UL1 TR000093NCATS NIH HHS UL1 TR001085NIDDK NIH HHS T32 DK007217NIDDK NIH HHS T32-DK007217
6 · The paper itself

Abstract

Patients with pancreatic agenesis are born without a pancreas, causing permanent neonatal diabetes and pancreatic enzyme insufficiency. These patients require insulin and enzyme replacement therapy to survive, grow, and maintain normal blood glucose levels. Pancreatic agenesis is an uncommon condition but high-throughput sequencing methods provide a rare opportunity to identify critical genes that are necessary for human pancreas development. Here we present the clinical history, evaluation, and the genetic and molecular analysis from two patients with pancreatic agenesis. Both patients were born with intrauterine growth restriction, minor heart defects and neonatal diabetes. In both cases, pancreatic agenesis was confirmed by imaging studies. The patients are clinically stable with pancreatic enzymes and insulin therapy. In order identify the etiology for their disease, we performed whole exome sequencing on both patients. For each proband we identified a de novo heterozygous mutation in the GATA6 gene. GATA6 is a homeobox containing transcription factor involved in both early development of the pancreas and heart. In vitro functional analysis of one of the variants revealed that the mutation creates a premature stop codon in the coding sequence resulting in the production of a truncated protein with loss of activity. These results show how genetic mutations in GATA6 may lead to functional inactivity and pancreatic agenesis in humans.

Indexed as

MutationGATA6 Transcription FactorHeart Defects, CongenitalHumansInfant, NewbornMalePancreasPancreatic DiseasesTranscription, GeneticGATA6 protein, humanGATA6 Transcription Factor

Identifiers

PMID25706805
PMCPMC4338276
OpenAlexW2032114303

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.