Evidence map›Paper›PMID 25705890›Full record

ArticlePloS one2015

Molecular characterization of the peripheral airway field of cancerization in lung adenocarcinoma.

Jun-Chieh J Tsay, Zhiguo Li, Ting-An Yie, Feng Wu, Leopoldo Segal, Alissa K Greenberg, Eric Leibert, Michael D Weiden, Harvey Pass, John Munger and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  3. Review
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  6. Review
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  8. Article
  9. Article
  10. Article
  11. Airway Microbiota Is Associated with Upregulation of the PI3K Pathway in Lung Cancer.American journal of respiratory and critical care medicine · 2018
    Article
  12. A Noninvasive Test for MicroRNA Expression in Oral Squamous Cell Carcinoma.International journal of molecular sciences · 2018
    Article
  13. Article
  14. Article
  15. Update in Lung Cancer 2015.American journal of respiratory and critical care medicine · 2016
    Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Jun-Chieh J TsayDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Zhiguo LiCenter for Health Informatics and Bioinformatics, New York University Langone Medical Center, New York, New York, United States of America.
Ting-An YieDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Feng WuDepartment of Environmental Medicine, New York University School of Medicine, New York, New York, United States of America.
Leopoldo SegalDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Alissa K GreenbergDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Eric LeibertDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Michael D WeidenDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Harvey PassDivision of Thoracic Surgery, Department of Cardiothoracic Surgery, New York University School of Medicine, New York, New York, United States of America.
John MungerDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Alexander StatnikovCenter for Health Informatics and Bioinformatics, New York University Langone Medical Center, New York, New York, United States of America; Division of Translational Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America.
Kam-Meng Tchou-WongDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America; Department of Environmental Medicine, New York University School of Medicine, New York, New York, United States of America.
William N RomDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, New York University School of Medicine, New York, New York, United States of America; Department of Environmental Medicine, New York University School of Medicine, New York, New York, United States of America.
New York University · USNYU Langone Health · US

Funding

Project-005UL1TR001445 · NCATS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BREDELLA, MIRIAM ANTOINETTE, HOCHMAN, JUDITH S · 2015 to 2025
$103.5M
Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
Institutional Clinical and Translational Science AwardUL1TR000038 · NCATS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CRONSTEIN, BRUCE NEIL · 2012 to 2014
$16.8M
NYU Lung Cancer Biomarker CenterU01CA086137 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ROM, WILLIAM N · 2000 to 2015
$15.3M
Longtitudinal Studies of HIV-Associated Bacterial PneumoniaR01HL090316 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ROM, WILLIAM N · 2007 to 2013
$4.2M
Translational Research Training in Environmental MedicineT32ES007267 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ROM, WILLIAM N · 1992 to 2013
$4.0M
HIV activation in secondary pulmonary infectionK24AI080298 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WEIDEN, MICHAEL D. · 2008 to 2013
$868k
NCATS NIH HHS UL1 TR000038NCATS NIH HHS UL1 TR001445NCI NIH HHS P30 CA016087NCI NIH HHS U01 CA086137NCI NIH HHS UO1 CA086137NHLBI NIH HHS R01 HL090316NIAID NIH HHS K24 AI080298NIAID NIH HHS K24 AI080298ANIEHS NIH HHS T32 ES007267
6 · The paper itself

Abstract

Field of cancerization in the airway epithelium has been increasingly examined to understand early pathogenesis of non-small cell lung cancer. However, the extent of field of cancerization throughout the lung airways is unclear. Here we sought to determine the differential gene and microRNA expressions associated with field of cancerization in the peripheral airway epithelial cells of patients with lung adenocarcinoma. We obtained peripheral airway brushings from smoker controls (n=13) and from the lung contralateral to the tumor in cancer patients (n=17). We performed gene and microRNA expression profiling on these peripheral airway epithelial cells using Affymetrix GeneChip and TaqMan Array. Integrated gene and microRNA analysis was performed to identify significant molecular pathways. We identified 26 mRNAs and 5 miRNAs that were significantly (FDR <0.1) up-regulated and 38 mRNAs and 12 miRNAs that were significantly down-regulated in the cancer patients when compared to smoker controls. Functional analysis identified differential transcriptomic expressions related to tumorigenesis. Integration of miRNA-mRNA data into interaction network analysis showed modulation of the extracellular signal-regulated kinase/mitogen-activated protein kinase (ERK/MAPK) pathway in the contralateral lung field of cancerization. In conclusion, patients with lung adenocarcinoma have tumor related molecules and pathways in histologically normal appearing peripheral airway epithelial cells, a substantial distance from the tumor itself. This finding can potentially provide new biomarkers for early detection of lung cancer and novel therapeutic targets.

Indexed as

Gene Expression ProfilingAdenocarcinomaAgedCell Transformation, NeoplasticEpithelial CellsExtracellular Signal-Regulated MAP KinasesFemaleHumansLung NeoplasmsMaleMicroRNAsMiddle AgedOligonucleotide Array Sequence AnalysisRespiratory SystemReverse Transcriptase Polymerase Chain ReactionRNA, MessengerExtracellular Signal-Regulated MAP KinasesMicroRNAsRNA, Messenger

Identifiers

PMID25705890
PMCPMC4338284
OpenAlexW2029259641

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.