Evidence map›Paper›PMID 25704512›Full record

ArticleDevelopmental biology2015

BMP-dependent gene repression cascade in Drosophila eggshell patterning.

Enrica Charbonnier, Alisa Fuchs, Lily S Cheung, Mrinal Chayengia, Ville Veikkolainen, Janine Seyfferth, Stanislav Y Shvartsman, George Pyrowolakis

Erratum issuedAbstract read
In one paragraph

Article in Developmental biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Finishing the egg.Genetics · 2024
    Article
  5. Article
  6. A low affinityeLife · 2020
    Article
  7. Article
  8. Gene regulation duringProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  9. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Enrica CharbonnierInstitute for Biology I, Faculty of Biology, Albert-Ludwigs-University of Freiburg, Germany; Research Training Program GRK 1104, Albert-Ludwigs-University of Freiburg, Germany; BIOSS Centre for Biological Signaling Studies, Albert-Ludwigs-University of Freiburg, Schänzlestr. 18, 79104 Freiburg, Germany.
Alisa FuchsInstitute for Biology I, Faculty of Biology, Albert-Ludwigs-University of Freiburg, Germany.
Lily S CheungLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
Mrinal ChayengiaResearch Training Program GRK 1104, Albert-Ludwigs-University of Freiburg, Germany; BIOSS Centre for Biological Signaling Studies, Albert-Ludwigs-University of Freiburg, Schänzlestr. 18, 79104 Freiburg, Germany.
Ville VeikkolainenBIOSS Centre for Biological Signaling Studies, Albert-Ludwigs-University of Freiburg, Schänzlestr. 18, 79104 Freiburg, Germany.
Janine SeyfferthInstitute for Biology I, Faculty of Biology, Albert-Ludwigs-University of Freiburg, Germany; BIOSS Centre for Biological Signaling Studies, Albert-Ludwigs-University of Freiburg, Schänzlestr. 18, 79104 Freiburg, Germany.
Stanislav Y ShvartsmanLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
George PyrowolakisInstitute for Biology I, Faculty of Biology, Albert-Ludwigs-University of Freiburg, Germany; BIOSS Centre for Biological Signaling Studies, Albert-Ludwigs-University of Freiburg, Schänzlestr. 18, 79104 Freiburg, Germany. Electronic address: g.pyrowolakis@biologie.uni-freiburg.de.
University of Freiburg · DEPrinceton University · US

Funding

Dynamics of epithelial morphogenesisR01GM107103 · NIGMS · PRINCETON UNIVERSITY · PI SHVARTSMAN, STANISLAV Y. · 2014 to 2017
$1.2M
NIGMS NIH HHS 1R01GM107103-01A1NIGMS NIH HHS R01 GM107103
6 · The paper itself

Abstract

Bone Morphogenetic Proteins (BMPs) signal by activating Smad transcription factors to control a number of decisions during animal development. In Drosophila, signaling by the BMP ligand Decapentaplegic (Dpp) involves the activity of brinker (brk) which, in most contexts, is repressed by Dpp. Brk encodes a transcription factor which represses BMP signaling output by antagonizing Smad-dependent target gene activation. Here, we study BMP-dependent gene regulation during Drosophila oogenesis by following the signal transmission from Dpp to its target broad (br), a gene with a crucial function in eggshell patterning. We identify regulatory sequences that account for expression of both brk and br, and connect these to the transcription factors of the pathway. We show that Dpp directly regulates brk transcription through Smad- and Schnurri (Shn)-dependent repression. Brk is epistatic to Dpp in br expression and activates br indirectly, through removal of a repressor, which is yet to be identified. Our work provides first cis-regulatory insights into transcriptional interpretation of BMP signaling in eggshell morphogenesis and defines a transcriptional cascade that connects Dpp to target gene regulation.

Indexed as

AnimalsBody PatterningBone Morphogenetic ProteinsDrosophila melanogasterDrosophila ProteinsFemaleGene Expression Regulation, DevelopmentalOogenesisOvarian FollicleRepressor ProteinsBone Morphogenetic Proteinsbrk protein, Drosophiladpp protein, DrosophilaDrosophila ProteinsRepressor ProteinsBMP signalingBrinkerBroadDppDrosophilaOogenesis

Identifiers

PMID25704512
PMCPMC4694571
OpenAlexW2037726682

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.