Evidence map›Paper›PMID 25704008›Full record

ArticleCell host & microbe2015

Influenza virus adaptation PB2-627K modulates nucleocapsid inhibition by the pathogen sensor RIG-I.

Michaela Weber, Hanna Sediri, Ulrike Felgenhauer, Ina Binzen, Sebastian Bänfer, Ralf Jacob, Linda Brunotte, Adolfo García-Sastre, Jonathan L Schmid-Burgk, Tobias Schmidt and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 136 citations in OpenAlex.

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33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Michaela WeberInstitute for Virology, Philipps-University Marburg, D-35043 Marburg, Germany.
Hanna SediriInstitute for Virology, Philipps-University Marburg, D-35043 Marburg, Germany.
Ulrike FelgenhauerInstitute for Virology, Philipps-University Marburg, D-35043 Marburg, Germany.
Ina BinzenInstitute for Virology, Philipps-University Marburg, D-35043 Marburg, Germany.
Sebastian BänferDepartment of Cell Biology and Cell Pathology, Philipps-University Marburg, D-35043 Marburg, Germany.
Ralf JacobDepartment of Cell Biology and Cell Pathology, Philipps-University Marburg, D-35043 Marburg, Germany.
Linda BrunotteInstitute for Virology, University Medical Center, D-79008 Freiburg, Germany.
Adolfo García-SastreDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Department of Medicine, Division of Infectious Diseases, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Jonathan L Schmid-BurgkInstitute of Molecular Medicine, University Hospital, University of Bonn, D-53127 Bonn, Germany.
Tobias SchmidtInstitute of Molecular Medicine, University Hospital, University of Bonn, D-53127 Bonn, Germany.
Veit HornungInstitute of Molecular Medicine, University Hospital, University of Bonn, D-53127 Bonn, Germany.
Georg KochsInstitute for Virology, University Medical Center, D-79008 Freiburg, Germany.
Martin SchwemmleInstitute for Virology, University Medical Center, D-79008 Freiburg, Germany.
Hans-Dieter KlenkInstitute for Virology, Philipps-University Marburg, D-35043 Marburg, Germany.
Friedemann WeberInstitute for Virology, Philipps-University Marburg, D-35043 Marburg, Germany. Electronic address: friedemann.weber@staff.uni-marburg.de.
Philipps University of Marburg · DEUniversity Medical Center Freiburg · DEUniversity of Bonn · DEIcahn School of Medicine at Mount Sinai · USUniversity Hospital Bonn · DE

Funding

TRIM mediated host antiviral responses during influenza virus infectionsU19AI083025 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2009 to 2013
$10.0M
NIAID NIH HHS HHSN272201000054CNIAID NIH HHS HHSN272201400008CNIAID NIH HHS U19 AI083025NIAID NIH HHS U19AI083025PHS HHS HHSN272201400008CPHS HHS NIAD HHSN 272201000054C
6 · The paper itself

Abstract

The cytoplasmic RNA helicase RIG-I mediates innate sensing of RNA viruses. The genomes of influenza A virus (FLUAV) are encapsidated by the nucleoprotein and associated with RNA polymerase, posing potential barriers to RIG-I sensing. We show that RIG-I recognizes the 5'-triphosphorylated dsRNA on FLUAV nucleocapsids but that polymorphisms at position 627 of the viral polymerase subunit PB2 modulate RIG-I sensing. Compared to mammalian-adapted PB2-627K, avian FLUAV nucleocapsids possessing PB2-627E are prone to increased RIG-I recognition, and RIG-I-deficiency partially restores PB2-627E virus infection of mammalian cells. Heightened RIG-I sensing of PB2-627E nucleocapsids correlates with previously established lower affinity of 627E-containing PB2 for nucleoprotein and is increased by further nucleocapsid instability. The effect of RIG-I on PB2-627E nucleocapsids is independent of antiviral signaling, suggesting that RIG-I-nucleocapsid binding alone can inhibit infection. These results indicate that RIG-I is a direct avian FLUAV restriction factor and highlight nucleocapsid disruption as an antiviral strategy.

Indexed as

Host-Pathogen InteractionsAnimalsCell LineDEAD Box Protein 58DEAD-box RNA HelicasesHumansInfluenza A virusMutant ProteinsNucleocapsidOrthomyxoviridaeProtein BindingReceptors, ImmunologicRNA-Dependent RNA PolymeraseRNA, Double-StrandedRNA, ViralViral ProteinsDEAD Box Protein 58DEAD-box RNA HelicasesMutant ProteinsPB2 protein, Influenzavirus AReceptors, ImmunologicRIGI protein, humanRNA-Dependent RNA PolymeraseRNA, Double-StrandedRNA, ViralViral Proteins

Identifiers

PMID25704008
PMCPMC4359673
OpenAlexW2133058176

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.