Evidence map›Paper›PMID 25701870›Full record

ArticleHuman molecular genetics2015

Mutations in DCPS and EDC3 in autosomal recessive intellectual disability indicate a crucial role for mRNA decapping in neurodevelopment.

Iltaf Ahmed, Rebecca Buchert, Mi Zhou, Xinfu Jiao, Kirti Mittal, Taimoor I Sheikh, Ute Scheller, Nasim Vasli, Muhammad Arshad Rafiq, M Qasim Brohi and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

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  14. Synthesis of 2-Oxoquinoline Derivatives as Dual Pim and mTORC Protein Kinase Inhibitors.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 6 countries.

Iltaf AhmedMolecular Neuropsychiatry and Development Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, 250 College Street, Toronto, Ontario, Canada M5T 1R8 Atta-ur-Rehman School of Applied Biosciences (ASAB), National University of Sciences and Technology (NUST), Islamabad 44000, Pakistan.
Rebecca BuchertInstitute of Human Genetics and.
Mi ZhouDepartment of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ 08854, USA.
Xinfu JiaoDepartment of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ 08854, USA.
Kirti MittalMolecular Neuropsychiatry and Development Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, 250 College Street, Toronto, Ontario, Canada M5T 1R8.
Taimoor I SheikhMolecular Neuropsychiatry and Development Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, 250 College Street, Toronto, Ontario, Canada M5T 1R8.
Ute SchellerInstitute of Human Genetics and.
Nasim VasliMolecular Neuropsychiatry and Development Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, 250 College Street, Toronto, Ontario, Canada M5T 1R8.
Muhammad Arshad RafiqMolecular Neuropsychiatry and Development Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, 250 College Street, Toronto, Ontario, Canada M5T 1R8.
M Qasim BrohiSir Cowasji Jehangir Institute of Psychiatry, Hyderabad, Sindh 71000, Pakistan.
Anna MikhailovMolecular Neuropsychiatry and Development Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, 250 College Street, Toronto, Ontario, Canada M5T 1R8.
Muhammad AyazLahore Institute of Research and Development, Lahore 51000, Pakistan.
Attya BhattiAtta-ur-Rehman School of Applied Biosciences (ASAB), National University of Sciences and Technology (NUST), Islamabad 44000, Pakistan.
Heinrich StichtBioinformatics, Institute of Biochemistry, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen 91054, Germany.
Tanveer NasrDepartment of Psychiatry, Mayo Hospital, Lahore 54000, Pakistan Department of Psychiatry, Chaudhary Hospital, Gujranwala 52250, Pakistan.
Melissa T CarterDivision of Clinical and Metabolic Genetics, Department of Pediatrics, The Hospital for Sick Children, Toronto, Ontario, Canada M5G1X8.
Steffen UebeInstitute of Human Genetics and.
André ReisInstitute of Human Genetics and.
Muhammad AyubLahore Institute of Research and Development, Lahore 51000, Pakistan Division of Developmental Disabilities, Department of Psychiatry, Queen's University, Kingston, Ontario, Canada K7L 3N6.
Peter JohnAtta-ur-Rehman School of Applied Biosciences (ASAB), National University of Sciences and Technology (NUST), Islamabad 44000, Pakistan.
Megerditch KiledjianDepartment of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ 08854, USA kiledjian@biology.rutgers.edu john.vincent@camh.ca john_vincent@camh.net Rami.AbouJamra@uk-erlangen.de.
John B VincentMolecular Neuropsychiatry and Development Lab, Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, 250 College Street, Toronto, Ontario, Canada M5T 1R8 Department of Psychiatry and Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada M5S 2J7 kiledjian@biology.rutgers.edu john.vincent@camh.ca john_vincent@camh.net Rami.AbouJamra@uk-erlangen.de.
Rami Abou JamraInstitute of Human Genetics and kiledjian@biology.rutgers.edu john.vincent@camh.ca john_vincent@camh.net Rami.AbouJamra@uk-erlangen.de.
Institute of Human Genetics · PLMental Health Research Institute · AUNational University of Sciences and Technology · PKRutgers, The State University of New Jersey · USCentre for Addiction and Mental Health · CAFriedrich-Alexander-Universität Erlangen-Nürnberg · DEHospital for Sick Children · CAMayo Hospital · PKQueen's University · CAUniversity of Toronto · CA

Funding

Regulation of Mammalian mRNA DecayR01GM067005 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI KILEDJIAN, MEGERDITCH · 2004 to 2022
$5.5M
Canadian Institutes of Health Research MOP-102758NIGMS NIH HHS GM067005NIGMS NIH HHS R01 GM067005
6 · The paper itself

Abstract

There are two known mRNA degradation pathways, 3' to 5' and 5' to 3'. We identified likely pathogenic variants in two genes involved in these two pathways in individuals with intellectual disability. In a large family with multiple branches, we identified biallelic variants in DCPS in three affected individuals; a splice site variant (c.636+1G>A) that results in an in-frame insertion of 45 nucleotides and a missense variant (c.947C>T; p.Thr316Met). DCPS decaps the cap structure generated by 3' to 5' exonucleolytic degradation of mRNA. In vitro decapping assays showed an ablation of decapping function for both variants in DCPS. In another family, we identified a homozygous mutation (c.161T>C; p.Phe54Ser) in EDC3 in two affected children. EDC3 stimulates DCP2, which decaps mRNAs at the beginning of the 5' to 3' degradation pathway. In vitro decapping assays showed that altered EDC3 is unable to enhance DCP2 decapping at low concentrations and even inhibits DCP2 decapping at high concentration. We show that individuals with biallelic mutations in these genes of seemingly central functions are viable and that these possibly lead to impairment of neurological functions linking mRNA decapping to normal cognition. Our results further affirm an emerging theme linking aberrant mRNA metabolism to neurological defects.

Indexed as

AdolescentChildConsanguinityEndoribonucleasesFemaleGenes, RecessiveGenetic Association StudiesHumansIntellectual DisabilityMaleMutation, MissensePedigreePoint MutationPolymorphism, Single NucleotideProtein IsoformsRibonucleoproteins, Small NuclearDcpS protein, humanEDC3 protein, humanEndoribonucleasesProtein IsoformsRibonucleoproteins, Small NuclearRNA, MessengerRNA Splice Sites

Identifiers

PMID25701870
PMCPMC4424955
OpenAlexW2095852612

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.