Evidence map›Paper›PMID 25699072›Full record

ArticleFrontiers in plant science2015

Effect of IAA on in vitro growth and colonization of Nostoc in plant roots.

Anwar Hussain, Syed T Shah, Hazir Rahman, Muhammad Irshad, Amjad Iqbal

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
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  6. Review
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  12. Diversity, Lifestyle, Genomics, and Their Functional Role ofJournal of fungi (Basel, Switzerland) · 2023
    Review
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  19. Article
  20. Endophytic FungusBioMed research international · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Anwar HussainDepartment of Botany, University College of Science Shankar Campus, Abdul Wali Khan University Mardan, Mardan Pakistan.
Syed T ShahNuclear Institute for Food and Agriculture, Tarnab Peshawar Pakistan.
Hazir RahmanDepartment of Microbiology, Kohat University of Science and Technology, Kohat Pakistan.
Muhammad IrshadDepartment of Botany, University College of Science Shankar Campus, Abdul Wali Khan University Mardan, Mardan Pakistan.
Amjad IqbalDepartment of Food Science, University College of Science Shankar Campus, Abdul Wali Khan University Mardan, Mardan Pakistan.
Kohat University of Science and Technology · PKNuclear Institute for Agriculture and Biology · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nostoc is widely known for its ability to fix atmospheric nitrogen and the establishment of symbiotic relationship with a wide range of plants from various taxonomic groups. Several strains of Nostoc produce phytohormones that promote growth of its plant partners. Nostoc OS-1 was therefore selected for study because of the presence of putative ipdC gene that encodes a key enzyme to produce Indole-3-acetic acid (IAA). The results indicated that both cellular and released IAA was found high with increasing incubation time and reached to a peak value (i.e., 21 pmol mg(-1)ch-a) on the third week as determined by UPLC-ESI-MS/MS. Also the Nostoc OS-1 strain efficiently colonized the roots and promoted the growth of rice as well as wheat under axenic conditions and induced ipdC gene that suggested the possible involvement of IAA in these phenotypes. To confirm the impact of IAA on root colonization efficiency and plant promoting phenotypes of Nostoc OS-1, an ipdC knockout mutant was generated by homologous recombinant method. The amount of releasing IAA, in vitro growth, root colonization, and plant promoting efficiency of the ipdC knockout mutant was observed significantly lower than wild type strain under axenic conditions. Importantly, these phenotypes were restored to wild-type levels when the ipdC knockout mutant was complemented with wild type ipdC gene. These results together suggested that ipdC and/or synthesized IAA of Nostoc OS-1 is required for its efficient root colonization and plant promoting activity.

Indexed as

endophyteIAAknockoutNostocphytostimulationputative ipdC

Identifiers

PMID25699072
PMCPMC4318279
OpenAlexW2082506193

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.