Evidence map›Paper›PMID 25697797›Full record

ArticleJournal of experimental botany2015

PETAL LOSS, a trihelix transcription factor that represses growth in Arabidopsis thaliana, binds the energy-sensing SnRK1 kinase AKIN10.

Martin O'Brien, Ruth N Kaplan-Levy, Tezz Quon, Pia G Sappl, David R Smyth

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Metabolites · 2023
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  6. Article
  7. Interactome of Arabidopsis Thaliana.Plants (Basel, Switzerland) · 2022
    Article
  8. COE2 Is Required for the Root Foraging Response to Nitrogen Limitation.International journal of molecular sciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Martin O'BrienSchool of Biological Sciences, Monash University, Melbourne, Vic. 3800, Australia.
Ruth N Kaplan-LevySchool of Biological Sciences, Monash University, Melbourne, Vic. 3800, Australia.
Tezz QuonSchool of Biological Sciences, Monash University, Melbourne, Vic. 3800, Australia.
Pia G SapplSchool of Biological Sciences, Monash University, Melbourne, Vic. 3800, Australia.
David R SmythSchool of Biological Sciences, Monash University, Melbourne, Vic. 3800, Australia david.smyth@monash.edu.
Monash University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Organogenesis in plants involves differential growth. Rapidly growing primordia are distinguished from the meristem and each other by slower growing boundaries. PETAL LOSS (PTL) is a trihelix transcription factor of Arabidopsis that represses growth in boundaries between newly arising sepals. To identify partners involved in this growth limitation, a young inflorescence cDNA library was screened by yeast two-hybrid technology with PTL as bait. The most frequent prey identified was AKIN10, the catalytic α-subunit of the Snf1-related kinase1 (SnRK1). Interaction was mapped to the C-terminal (non-kinase) half of AKIN10 and the N-terminal portion of PTL. Binding of PTL was specific to AKIN10 as there was little binding to the related AKIN11. The interaction was confirmed by co-immunoprecipitation in vitro. Fluorescently tagged products of 35S:YFP-AKIN10 and 35S:CFP-PTL also interacted when transiently expressed together in leaf cells of Nicotiana benthamiana. In this case, most of the cytoplasmic AKIN10 was preferentially moved to the nucleus where PTL accumulated, possibly because a nuclear export sequence in AKIN10 was now masked. During these experiments, we observed that AKIN10 could variably accumulate in the Golgi, shown by its co-localization with a tagged Golgi marker and through its dispersal by brefeldin A. Tests of phosphorylation of PTL by AKIN10 gave negative results. The functional significance of the PTL-AKIN10 interaction remains open, although a testable hypothesis is that AKIN10 senses lower energy levels in inter-sepal zones and, in association with PTL, promotes reduced cell division.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantProtein Serine-Threonine KinasesTranscription FactorsArabidopsis ProteinsAt3g01090 protein, ArabidopsisProtein Serine-Threonine KinasesPTL protein, ArabidopsisTranscription FactorsAKIN10ArabidopsisGolgiPETAL LOSSSnRK1transcription factortrihelix.

Identifiers

PMID25697797
PMCPMC4986862
OpenAlexW2150831946

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.