Evidence map›Paper›PMID 25697760›Full record

ReviewMethods (San Diego, Calif.)2015

Methodological aspects of the molecular and histological study of prostate cancer: focus on PTEN.

Aitziber Ugalde-Olano, Ainara Egia, Sonia Fernández-Ruiz, Ana Loizaga-Iriarte, Patricia Zuñiga-García, Stephane Garcia, Félix Royo, Isabel Lacasa-Viscasillas, Erika Castro, Ana R Cortazar and 28 more

Open access · hybridAbstract readReview
In one paragraph

Review in Methods (San Diego, Calif.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  11. Analytic validation of a clinical-grade PTEN immunohistochemistry assay in prostate cancer by comparison with PTEN FISH.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors at 7 institutions in 3 countries.

Aitziber Ugalde-OlanoDepartment of Pathology, Basurto University Hospital, 48013 Bilbao, Spain.
Ainara EgiaBasque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Sonia Fernández-RuizCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Ana Loizaga-IriarteDepartment of Urology, Basurto University Hospital, 48013 Bilbao, Spain.
Patricia Zuñiga-GarcíaCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Stephane GarciaCentre de Recherche en Carcérologie de Marseille (CRCM), INSERM UMR 1068, CNRS UMR 7258, Aix-Marseille University and Institut Paoli-Calmettes, Parc Scientifique et Technologique de Luminy, Marseille, France.
Félix RoyoCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain; Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (Ciberehd), Spain.
Isabel Lacasa-ViscasillasDepartment of Urology, Basurto University Hospital, 48013 Bilbao, Spain.
Erika CastroBasque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Ana R CortazarCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Amaia Zabala-LetonaCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Natalia Martín-MartínCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Amaia Arruabarrena-AristorenaCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Verónica Torrano-MoyaCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Lorea Valcárcel-JiménezCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Pilar Sánchez-MosqueraCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Alfredo Caro-MaldonadoCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Jorge González-TampanDepartment of Urology, Basurto University Hospital, 48013 Bilbao, Spain.
Guido Cachi-FuentesDepartment of Urology, Basurto University Hospital, 48013 Bilbao, Spain.
Elena BilbaoDepartment of Urology, Basurto University Hospital, 48013 Bilbao, Spain.
Rocío MonteroDepartment of Urology, Basurto University Hospital, 48013 Bilbao, Spain.
Sara FernándezDepartment of Pathology, Basurto University Hospital, 48013 Bilbao, Spain; Basque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Edurne ArrietaBasque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Kerman ZorrozaBasque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Mireia Castillo-MartínDepartment of Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Violeta SerraMolecular Therapeutics Research Unit, Medical Oncology Department, Vall d'Hebron University Hospital, Barcelona, Spain; Experimental Therapeutics Group, Vall d'Hebron University Hospital, Barcelona, Spain.
Eider SalazarBasque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Nuria Macías-CámaraCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain.
Jose TaberneroMolecular Therapeutics Research Unit, Medical Oncology Department, Vall d'Hebron University Hospital, Barcelona, Spain; Experimental Therapeutics Group, Vall d'Hebron University Hospital, Barcelona, Spain.
Jose BaselgaMolecular Therapeutics Research Unit, Medical Oncology Department, Vall d'Hebron University Hospital, Barcelona, Spain; Experimental Therapeutics Group, Vall d'Hebron University Hospital, Barcelona, Spain; Human Oncology & Pathogenesis Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Carlos Cordón-CardoDepartment of Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ana M AransayCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain; Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (Ciberehd), Spain.
Amaia Del VillarBasque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Juan L IovannaCentre de Recherche en Carcérologie de Marseille (CRCM), INSERM UMR 1068, CNRS UMR 7258, Aix-Marseille University and Institut Paoli-Calmettes, Parc Scientifique et Technologique de Luminy, Marseille, France.
Juan M Falcón-PérezCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain; Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (Ciberehd), Spain; Ikerbasque, Basque Foundation for Science, Bilbao, Spain.
Miguel UndaDepartment of Urology, Basurto University Hospital, 48013 Bilbao, Spain.
Roberto BilbaoBasque Biobank, Basque Foundation for Health Innovation and Research-BIOEF, Barakaldo, Spain.
Arkaitz CarracedoCIC bioGUNE, Bizkaia Technology Park, 801 Building, 48160 Derio, Spain; Ikerbasque, Basque Foundation for Science, Bilbao, Spain; Biochemistry and Molecular Biology Department, University of the Basque Country (UPV/EHU), Bilbao, Spain. Electronic address: acarracedo@cicbiogune.es.
CIC bioGUNE · ESHospital de Basurto · ESBioef - Fundación Vasca de Innovación e Investigación Sanitarias · ESIcahn School of Medicine at Mount Sinai · USCentre de Recherche en Cancérologie de Marseille · FRInserm · FRMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
European Research Council 336343NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Prostate cancer is among the most frequent cancers in men, and despite its high rate of cure, the high number of cases results in an elevated mortality worldwide. Importantly, prostate cancer incidence is dramatically increasing in western societies in the past decades, suggesting that this type of tumor is exquisitely sensitive to lifestyle changes. Prostate cancer frequently exhibits alterations in the PTEN gene (inactivating mutations or gene deletions) or at the protein level (reduced protein expression or altered sub-cellular compartmentalization). The relevance of PTEN in this type of cancer is further supported by the fact that the sole deletion of PTEN in the murine prostate epithelium recapitulates many of the features of the human disease. In order to study the molecular alterations in prostate cancer, we need to overcome the methodological challenges that this tissue imposes. In this review we present protocols and methods, using PTEN as proof of concept, to study different molecular characteristics of prostate cancer.

Indexed as

AnimalsHumansMaleMiceMutationProstatic NeoplasmsPTEN PhosphohydrolaseTumor Suppressor ProteinsPTEN PhosphohydrolasePTEN protein, humanTumor Suppressor ProteinsFresh tissueMolecular biologyProstate cancerPTEN

Identifiers

PMID25697760
PMCPMC4503808
OpenAlexW2016059982

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.