Evidence map›Paper›PMID 25697503›Full record

ArticleNucleic acids research2015

Alu RNA regulates the cellular pool of active ribosomes by targeted delivery of SRP9/14 to 40S subunits.

Elena Ivanova, Audrey Berger, Anne Scherrer, Elena Alkalaeva, Katharina Strub

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Elena IvanovaDépartement de biologie cellulaire, Université de Genève, Sciences III, 1211 Genève, Switzerland Katharina.Strub@unige.ch.
Audrey BergerDépartement de biologie cellulaire, Université de Genève, Sciences III, 1211 Genève, Switzerland.
Anne ScherrerDépartement de biologie cellulaire, Université de Genève, Sciences III, 1211 Genève, Switzerland.
Elena AlkalaevaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, 119991 Moscow, Russia.
Katharina StrubDépartement de biologie cellulaire, Université de Genève, Sciences III, 1211 Genève, Switzerland Katharina.Strub@unige.ch.
Engelhardt Institute of Molecular Biology · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human genome contains about 1.5 million Alu elements, which are transcribed into Alu RNAs by RNA polymerase III. Their expression is upregulated following stress and viral infection, and they associate with the SRP9/14 protein dimer in the cytoplasm forming Alu RNPs. Using cell-free translation, we have previously shown that Alu RNPs inhibit polysome formation. Here, we describe the mechanism of Alu RNP-mediated inhibition of translation initiation and demonstrate its effect on translation of cellular and viral RNAs. Both cap-dependent and IRES-mediated initiation is inhibited. Inhibition involves direct binding of SRP9/14 to 40S ribosomal subunits and requires Alu RNA as an assembly factor but its continuous association with 40S subunits is not required for inhibition. Binding of SRP9/14 to 40S prevents 48S complex formation by interfering with the recruitment of mRNA to 40S subunits. In cells, overexpression of Alu RNA decreases translation of reporter mRNAs and this effect is alleviated with a mutation that reduces its affinity for SRP9/14. Alu RNPs also inhibit the translation of cellular mRNAs resuming translation after stress and of viral mRNAs suggesting a role of Alu RNPs in adapting the translational output in response to stress and viral infection.

Indexed as

Alu ElementsAmino Acid SequenceBase SequenceElectrophoresis, Polyacrylamide GelHEK293 CellsHumansMolecular Sequence DataProtein BindingRibonucleoproteinsRibosomesRibosome Subunits, Small, EukaryoticRNARNA, MessengerRNA, ViralSequence Homology, Amino AcidSequence Homology, Nucleic AcidRibonucleoproteinsRNARNA, MessengerRNA, ViralSignal Recognition ParticleSRP14 protein, humanSRP9 protein, human

Identifiers

PMID25697503
PMCPMC4357698
OpenAlexW2143510811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.