Evidence map›Paper›PMID 25697417›Full record

ArticleMolecular biology reports2015

Transcriptomic study of mouse embryonic neural stem cell differentiation under ethanol treatment.

Chanchal Mandal, Ji Hyun Park, Mi Ran Choi, Sun Hwa Kim, Abimbola Comfort Badejo, Jin Choul Chai, Young Seek Lee, Kyoung Hwa Jung, Young Gyu Chai

Abstract read
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In one paragraph

Article in Molecular biology reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. International journal of biological sciences · 2017
    Review
  7. Article
  8. TBL1XR1 in physiological and pathological states.American journal of clinical and experimental urology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Chanchal MandalDepartment of Molecular and Life Science, Hanyang University, 1271 Sa-dong, Ansan, Republic of Korea.
Ji Hyun Park
Mi Ran Choi
Sun Hwa Kim
Abimbola Comfort Badejo
Jin Choul Chai
Young Seek Lee
Kyoung Hwa Jung
Young Gyu Chai
Hanyang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neural stem cells (NSCs) can be differentiated into one of three cell lineages: neurons, astrocytes or, oligodendrocytes. Some neurotoxins have the ability to deregulate this dynamic process. NSC cell fate can be altered by ethanol as reported previously. Our aim was to investigate the alteration of genes by ethanol during NSC differentiation and to explore the molecular mechanism underlying this phenomenon. Here, mouse fetal forebrain derived NSCs were differentiated for 2 days with or without of ethanol (50 mM). We performed a comparative microarray analysis at day two using GeneChip(®) Mouse Genome 430A 2.0 arrays. Microarray analysis showed that the expressions of 496 genes were altered by ethanol (56 and 440 were up- and down-regulated, respectively). Kyoto Encyclopedia of Genes and Genomes pathway analysis revealed the association of the following altered genes in the Wnt signaling pathway: Wnt5a, Csnk2a1, Tcf7l2, Ccnd2, Nlk, Tbl1x, Tbl1xr1, Rac2 and Nfatc3. Quantitative real time PCR analysis also demonstrated the relative expression levels of these genes. As Wnt signaling is a player of brain development, ethanol-induced alterations may contribute to improper development of the brain. Our data could be a useful resource for elucidating the mechanism behind the ethanol neurotoxicity in developing brain.

Indexed as

TranscriptomeAnimalsAstrocytesCell DifferentiationCell LineageCyclinsEthanolFetusGene Expression Regulation, DevelopmentalGene Regulatory NetworksMiceMice, Inbred C57BLMicroarray AnalysisMitogen-Activated Protein KinasesNeural Stem CellsNeuronsCyclinsEthanolMitogen-Activated Protein KinasesWnt Proteins

Identifiers

PMID25697417
OpenAlexW2013211099

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.