Evidence map›Paper›PMID 25695510›Full record

ArticlePloS one2015

Transcriptional attenuation controls macrolide inducible efflux and resistance in Streptococcus pneumoniae and in other Gram-positive bacteria containing mef/mel(msr(D)) elements.

Scott T Chancey, Xianhe Bai, Nikhil Kumar, Elliott F Drabek, Sean C Daugherty, Thomas Colon, Sandra Ott, Naomi Sengamalay, Lisa Sadzewicz, Luke J Tallon and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. A Review of the Resistance Mechanisms forMedicina (Kaunas, Lithuania) · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Genomic Analysis ofFrontiers in microbiology · 2021
    Article
  15. The Novel Macrolide Resistance GenesAntimicrobial agents and chemotherapy · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The macrolide antibiotic renaissance.British journal of pharmacology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Scott T ChanceyDivision of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Atlanta, Georgia, United States of America; Laboratories of Microbial Pathogenesis, Department of Veterans Affairs Medical Center, Atlanta, Georgia, United States of America.
Xianhe BaiDivision of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Atlanta, Georgia, United States of America; Laboratories of Microbial Pathogenesis, Department of Veterans Affairs Medical Center, Atlanta, Georgia, United States of America.
Nikhil KumarInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Elliott F DrabekInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Sean C DaughertyInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Thomas ColonInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Sandra OttInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Naomi SengamalayInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Lisa SadzewiczInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Luke J TallonInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Claire M FraserInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America; Department of Medicine, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Hervé TettelinInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
David S StephensDivision of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Atlanta, Georgia, United States of America; Laboratories of Microbial Pathogenesis, Department of Veterans Affairs Medical Center, Atlanta, Georgia, United States of America.
University of Maryland, Baltimore · USVeterans Health Administration · USEmory University · US

Funding

Molecular bssis of mef-mediated antibiotic resistance in Streptococcus pneumoniaeR01AI070829 · NIAID · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2007 to 2010
$1.5M
NIAID NIH HHS HHSN272200900009CNIAID NIH HHS R01 AI070829PHS HHS HHSN272200900009C
6 · The paper itself

Abstract

Macrolide resistance, emerging in Streptococcus pneumoniae and other Gram-positive bacteria, is increasingly due to efflux pumps encoded by mef/mel(msr) operons found on discrete mobile genetic elements. The regulation of mef/mel(msr) in these elements is not well understood. We identified the mef(E)/mel transcriptional start, localized the mef(E)/mel promoter, and demonstrated attenuation of transcription as a mechanism of regulation of macrolide-inducible mef-mediated macrolide resistance in S. pneumoniae. The mef(E)/mel transcriptional start site was a guanine 327 bp upstream of mef(E). Consensus pneumococcal promoter -10 (5'-TATACT-3') and -35 (5'-TTGAAC-3') boxes separated by 17 bp were identified 7 bp upstream of the start site. Analysis of the predicted secondary structure of the 327 5' region identified four pairs of inverted repeats R1-R8 predicted to fold into stem-loops, a small leader peptide [MTASMRLR, (Mef(E)L)] required for macrolide induction and a Rho-independent transcription terminator. RNA-seq analyses provided confirmation of transcriptional attenuation. In addition, expression of mef(E)L was also influenced by mef(E)L-dependent mRNA stability. The regulatory region 5' of mef(E) was highly conserved in other mef/mel(msr)-containing elements including Tn1207.1 and the 5612IQ complex in pneumococci and Tn1207.3 in Group A streptococci, indicating a regulatory mechanism common to a wide variety of Gram-positive bacteria containing mef/mel(msr) elements.

Indexed as

Anti-Bacterial AgentsGram-Positive BacteriaMacrolidesMicrobial Sensitivity TestsStreptococcus pneumoniaeStreptococcus pyogenesAnti-Bacterial AgentsMacrolides

Identifiers

PMID25695510
PMCPMC4335068
OpenAlexW1982321286

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.