Evidence map›Paper›PMID 25695507›Full record

ArticlePLoS genetics2015

Essential Role for endogenous siRNAs during meiosis in mouse oocytes.

Paula Stein, Nikolay V Rozhkov, Fan Li, Fabián L Cárdenas, Olga Davydenko, Olga Davydenk, Lee E Vandivier, Brian D Gregory, Gregory J Hannon, Richard M Schultz

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 124 citations in OpenAlex.

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  17. AGO2 silences mobile transposons in the nucleus of quiescent cells.Nature structural & molecular biology · 2023
    Article
  18. Article
  19. Review
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Paula SteinDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Nikolay V RozhkovCold Spring Harbor Laboratory, Watson School of Biological Sciences and Howard Hughes Medical Institute, Cold Spring Harbor, New York, United States of America.
Fan LiDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Fabián L CárdenasDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Olga Davydenko
Olga DavydenkDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Lee E VandivierDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Brian D GregoryDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Gregory J HannonCold Spring Harbor Laboratory, Watson School of Biological Sciences and Howard Hughes Medical Institute, Cold Spring Harbor, New York, United States of America; CRUK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, United Kingdom.
Richard M SchultzDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
University of Pennsylvania · USCold Spring Harbor Laboratory · USHoward Hughes Medical Institute · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
TRAINING PROGRAM IN CELL AND MOLECULAR BIOLOGYT32GM007229 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BARTOLOMEI, MARISA S. · 1985 to 2023
$14.0M
Training Program in Computational GenomicsT32HG000046 · NHGRI · UNIVERSITY OF PENNSYLVANIA · PI JUNHYONG KIM, Mingyao Li · 1999 to 2026
$9.5M
PROTEIN PHOSPHORYLATION IN PREIMPLANTATION DEVELOPMENTR01HD022681 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI SCHULTZ, RICHARD MORRIS · 1987 to 2017
$3.6M
GENE EXPRESSION IN THE PREIMPLANTATION EMBRYOR37HD022681 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI SCHULTZ, RICHARD M · 1997 to 2006
$2.2M
Roles of small RNAs in guarding germ cell genomesR37GM062534 · NIGMS · NEW YORK GENOME CENTER · PI HANNON, GREGORY J · 2013 to 2017
$2.0M
Cancer Research UK 21143Howard Hughes Medical InstituteNCI NIH HHS P30 CA045508NHGRI NIH HHS 5T32HG000046-13NHGRI NIH HHS T32 HG000046NICHD NIH HHS HD022681NICHD NIH HHS R01 HD022681NICHD NIH HHS R37 HD022681NIGMS NIH HHS R37 GM062534NIGMS NIH HHS R37 GM062534-14NIGMS NIH HHS T32 GM007229
6 · The paper itself

Abstract

The RNase III enzyme DICER generates both microRNAs (miRNAs) and endogenous short interfering RNAs (endo-siRNAs). Both small RNA species silence gene expression post-transcriptionally in association with the ARGONAUTE (AGO) family of proteins. In mammals, there are four AGO proteins (AGO1-4), of which only AGO2 possesses endonucleolytic activity. siRNAs trigger endonucleolytic cleavage of target mRNAs, mediated by AGO2, whereas miRNAs cause translational repression and mRNA decay through association with any of the four AGO proteins. Dicer deletion in mouse oocytes leads to female infertility due to defects during meiosis I. Because mouse oocytes express both miRNAs and endo-siRNAs, this phenotype could be due to the absence of either class of small RNA, or both. However, we and others demonstrated that miRNA function is suppressed in mouse oocytes, which suggested that endo-siRNAs, not miRNAs, are essential for female meiosis. To determine if this was the case we generated mice that express a catalytically inactive knock-in allele of Ago2 (Ago2ADH) exclusively in oocytes and thereby disrupted the function of siRNAs. Oogenesis and hormonal response are normal in Ago2ADH oocytes, but meiotic maturation is impaired, with severe defects in spindle formation and chromosome alignment that lead to meiotic catastrophe. The transcriptome of these oocytes is widely perturbed and shows a highly significant correlation with the transcriptome of Dicer null and Ago2 null oocytes. Expression of the mouse transcript (MT), the most abundant transposable element in mouse oocytes, is increased. This study reveals that endo-siRNAs are essential during meiosis I in mouse females, demonstrating a role for endo-siRNAs in mammals.

Indexed as

AnimalsArgonaute ProteinsDNA Transposable ElementsEmbryonic Stem CellsFemaleGene Expression ProfilingGene Expression Regulation, DevelopmentalGerm CellsInfertility, FemaleMeiosisMiceMicroRNAsOocytesRNA, Small InterferingArgonaute ProteinsDNA Transposable ElementsMicroRNAsRNA, Small Interfering

Identifiers

PMID25695507
PMCPMC4335007
OpenAlexW2086752139

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.