Evidence map›Paper›PMID 25694596›Full record

ArticleJournal of virology2015

Functional analysis of the short isoform of orf virus protein OV20.0.

Yeu-Yang Tseng, Fong-Yuan Lin, Sun-Fang Cheng, David Tscharke, Songkhla Chulakasian, Chia-Chi Chou, Ya-Fen Liu, Wei-Shan Chang, Min-Liang Wong, Wei-Li Hsu

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Yeu-Yang TsengGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Fong-Yuan LinGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Sun-Fang ChengGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
David TscharkeResearch School of Biology, Australian National University, Canberra, Australian Capital Territory, Australia.ORCID http://orcid.org/0000-0001-6825-9172
Songkhla ChulakasianDepartment of Veterinary Medicine, College of Veterinary Medicine, National Chung Hsing University, Taichung, Taiwan.
Chia-Chi ChouDepartment of Veterinary Medicine, College of Veterinary Medicine, National Chung Hsing University, Taichung, Taiwan.
Ya-Fen LiuGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan.
Wei-Shan ChangDepartment and Graduate Institute of Veterinary Medicine, School of Veterinary Medicine, National Taiwan University, Taipei, Taiwan.
Min-Liang WongDepartment of Veterinary Medicine, College of Veterinary Medicine, National Chung Hsing University, Taichung, Taiwan.
Wei-Li HsuGraduate Institute of Microbiology and Public Health, National Chung Hsing University, Taichung, Taiwan wlhsu@dragon.nchu.edu.tw.
National Chung Hsing University · TWAustralian National University · AUNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledOrf virus (ORFV) OV20.0L is an ortholog of vaccinia virus (VACV) gene E3L. The function of VACV E3 protein as a virulence factor is well studied, but OV20.0 has received less attention. Here we show that like VACV E3L, OV20.0L encodes two proteins, a full-length protein and a shorter form (sh20). The shorter sh20 is an N-terminally truncated OV20.0 isoform generated when a downstream AUG codon is used for initiating translation. These isoforms differed in cellular localization, with full-length OV20.0 and sh20 found throughout the cell and predominantly in the cytoplasm, respectively. Nonetheless, both OV20.0 isoforms were able to bind double-stranded RNA (dsRNA)-activated protein kinase (PKR) and dsRNA. Moreover, both isoforms strongly inhibited PKR activation as shown by decreased phosphorylation of the translation initiation factor eIF2α subunit and protection of Sindbis virus infection against the activity of interferon (IFN). In spite of this apparent conservation of function in vitro, a recombinant ORFV that was able to express only the sh20 isoform was attenuated in a mouse model. IMPORTANCE: The OV20.0 protein of orf virus (ORFV) has two isoforms and contributes to virulence, but the roles of the two forms are not known. This study shows that the shorter isoform (sh20) arises due to use of a downstream initiation codon and is amino-terminally truncated. The sh20 form also differs in expression kinetics and cellular localization from full-length OV20.0. Similar to the full-length isoform, sh20 is able to bind dsRNA and PKR, inactivate PKR, and thus act as an antagonist of the interferon response in vitro. In vivo, however, wild-type OV20.0 could not be replaced with sh20 alone without a loss of virulence, suggesting that the functions of the isoforms are not simply redundant.

Indexed as

Amino Acid SequenceAnimalsCell LineDisease Models, AnimalDNAEcthyma, ContagiouseIF-2 KinaseEukaryotic Initiation Factor-2HumansMice, Inbred BALB CMolecular Sequence DataOrf virusPhosphorylationProtein BindingProtein IsoformsProtein Processing, Post-TranslationalDNAE3L protein, Vaccinia viruseIF-2 KinaseEukaryotic Initiation Factor-2OV20.0L protein, Orf virusProtein IsoformsRNA-Binding ProteinsViral Proteins

Identifiers

PMID25694596
PMCPMC4403464
OpenAlexW2075965028

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.