Evidence map›Paper›PMID 25694430›Full record

ArticleThe Journal of biological chemistry2015

Alternative splicing generates a novel truncated Cav1.2 channel in neonatal rat heart.

Ping Liao, Dejie Yu, Zhenyu Hu, Mui Cheng Liang, Jue Jin Wang, Chye Yun Yu, Gandi Ng, Tan Fong Yong, Jia Lin Soon, Yeow Leng Chua and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. CACNA1C-Related Channelopathies.Handbook of experimental pharmacology · 2023
    Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Ping LiaoFrom the National Neuroscience Institute, 11 Jalan Tan Tock Seng, Singapore 308433, Duke-NUS Graduate Medical School Singapore, Singapore 169857, ping_liao@nni.com.sg.
Dejie YuDepartment of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117597, and.
Zhenyu HuDepartment of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117597, and.
Mui Cheng LiangDepartment of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117597, and.
Jue Jin WangDepartment of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117597, and.
Chye Yun YuFrom the National Neuroscience Institute, 11 Jalan Tan Tock Seng, Singapore 308433.
Gandi NgFrom the National Neuroscience Institute, 11 Jalan Tan Tock Seng, Singapore 308433.
Tan Fong YongDepartment of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117597, and.
Jia Lin SoonNational Heart Centre Singapore, 5 Hospital Drive, Singapore 169609.
Yeow Leng ChuaNational Heart Centre Singapore, 5 Hospital Drive, Singapore 169609.
Tuck Wah SoongFrom the National Neuroscience Institute, 11 Jalan Tan Tock Seng, Singapore 308433, Department of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117597, and tuck_wah_soong@nuhs.edu.sg.
National University of Singapore · SGNational Neuroscience Institute · SGNational Heart Centre Singapore · SGDuke-NUS Medical School · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

L-type Cav1.2 Ca(2+) channel undergoes extensive alternative splicing, generating functionally different channels. Alternatively spliced Cav1.2 Ca(2+) channels have been found to be expressed in a tissue-specific manner or under pathological conditions. To provide a more comprehensive understanding of alternative splicing in Cav1.2 channel, we systematically investigated the splicing patterns in the neonatal and adult rat hearts. The neonatal heart expresses a novel 104-bp exon 33L at the IVS3-4 linker that is generated by the use of an alternative acceptor site. Inclusion of exon 33L causes frameshift and C-terminal truncation. Whole-cell electrophysiological recordings of Cav1.233L channels expressed in HEK 293 cells did not detect any current. However, when co-expressed with wild type Cav1.2 channels, Cav1.233L channels reduced the current density and altered the electrophysiological properties of the wild type Cav1.2 channels. Interestingly, the truncated 3.5-domain Cav1.233L channels also yielded a dominant negative effect on Cav1.3 channels, but not on Cav3.2 channels, suggesting that Cavβ subunits is required for Cav1.233L regulation. A biochemical study provided evidence that Cav1.233L channels enhanced protein degradation of wild type channels via the ubiquitin-proteasome system. Although the physiological significance of the Cav1.233L channels in neonatal heart is still unknown, our report demonstrates the ability of this novel truncated channel to modulate the activity of the functional Cav1.2 channels. Moreover, the human Cav1.2 channel also contains exon 33L that is developmentally regulated in heart. Unexpectedly, human exon 33L has a one-nucleotide insertion that allowed in-frame translation of a full Cav1.2 channel. An electrophysiological study showed that human Cav1.233L channel is a functional channel but conducts Ca(2+) ions at a much lower level.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsAnimals, NewbornBase SequenceCalcium Channels, L-TypeDNADNA PrimersExonsMaleMolecular Sequence DataMyocardiumRatsRats, WistarReverse Transcriptase Polymerase Chain ReactionCalcium Channels, L-TypeDNADNA PrimersL-type calcium channel alpha(1C)Alternative SplicingCalcium ChannelCardiac DevelopmentElectrophysiologyIon Channel

Identifiers

PMID25694430
PMCPMC4423710
OpenAlexW2017492952

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.