Evidence map›Paper›PMID 25692884›Full record

ArticlePloS one2015

Relevance of simultaneous mono-ubiquitinations of multiple units of PCNA homo-trimers in DNA damage tolerance.

Rie Kanao, Yuji Masuda, Saori Deguchi, Mayumi Yumoto-Sugimoto, Fumio Hanaoka, Chikahide Masutani

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Rie KanaoDepartment of Genome Dynamics, Research Institute of Environmental Medicine, Nagoya University, Nagoya, Japan; Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan.
Yuji MasudaDepartment of Genome Dynamics, Research Institute of Environmental Medicine, Nagoya University, Nagoya, Japan; Department of Toxicogenomics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Saori DeguchiGraduate School of Frontier Biosciences, Osaka University, Osaka, Japan.
Mayumi Yumoto-SugimotoGraduate School of Frontier Biosciences, Osaka University, Osaka, Japan.
Fumio HanaokaGraduate School of Frontier Biosciences, Osaka University, Osaka, Japan; Faculty of Science, Gakushuin University, Tokyo, Japan.
Chikahide MasutaniDepartment of Genome Dynamics, Research Institute of Environmental Medicine, Nagoya University, Nagoya, Japan; Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan.
Osaka University · JPGakushuin University · JPNagoya University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA damage tolerance (DDT) pathways, including translesion synthesis (TLS) and additional unknown mechanisms, enable recovery from replication arrest at DNA lesions. DDT pathways are regulated by post-translational modifications of proliferating cell nuclear antigen (PCNA) at its K164 residue. In particular, mono-ubiquitination by the ubiquitin ligase RAD18 is crucial for Polη-mediated TLS. Although the importance of modifications of PCNA to DDT pathways is well known, the relevance of its homo-trimer form, in which three K164 residues are present in a single ring, remains to be elucidated. Here, we show that multiple units of a PCNA homo-trimer are simultaneously mono-ubiquitinated in vitro and in vivo. RAD18 catalyzed sequential mono-ubiquitinations of multiple units of a PCNA homo-trimer in a reconstituted system. Exogenous PCNA formed hetero-trimers with endogenous PCNA in WI38VA13 cell transformants. When K164R-mutated PCNA was expressed in these cells at levels that depleted endogenous PCNA homo-trimers, multiple modifications of PCNA complexes were reduced and the cells showed defects in DDT after UV irradiation. Notably, ectopic expression of mutant PCNA increased the UV sensitivities of Polη-proficient, Polη-deficient, and REV1-depleted cells, suggesting the disruption of a DDT pathway distinct from the Polη- and REV1-mediated pathways. These results suggest that simultaneous modifications of multiple units of a PCNA homo-trimer are required for a certain DDT pathway in human cells.

Indexed as

Cell LineDNA-Binding ProteinsDNA DamageDNA-Directed DNA PolymeraseDNA RepairHumansIn Vitro TechniquesLysineMaleMutationProliferating Cell Nuclear AntigenUbiquitinationUbiquitin-Protein LigasesDNA-Binding ProteinsDNA-Directed DNA PolymeraseLysineProliferating Cell Nuclear AntigenRAD18 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID25692884
PMCPMC4332867
OpenAlexW2055521166

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.