Evidence map›Paper›PMID 25692607›Full record

ArticlePLoS computational biology2015

A unified model of shoot tropism in plants: photo-, gravi- and Propio-ception.

Renaud Bastien, Stéphane Douady, Bruno Moulia

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 49 citations in OpenAlex.

  1. Nonlinear distributed sensing of light patterns leads to perceptual distortions in plants.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. A field theory for plant tropisms.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Multiscale integration of environmental stimuli in plant tropism produces complex behaviors.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. The dynamics of plant nutation.Scientific reports · 2020
    Article
  10. Article
  11. Plant Bioinspired Ecological Robotics.Frontiers in robotics and AI · 2020
    Article
  12. Article
  13. Article
  14. Spatio-temporal integration in plant tropisms.Journal of the Royal Society, Interface · 2019
    Article
  15. Article
  16. Article
  17. Growth-mediated plant movements: hidden in plain sight.Current opinion in plant biology · 2018
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Renaud BastienInstitut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech, 78026 Versailles, France; INRA, UMR 547 PIAF, F-63100 Clermont Fd Cedex 01, France; Clermont Université, Université Blaise Pascal, UMR 547 PIAF, BP 10448, F-63000 Clermont-Ferrand, France; School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA.
Stéphane DouadyMatière et Systèmes Complexes, Université Paris-Diderot, 75025 Paris Cedex 13, France.
Bruno MouliaINRA, UMR 547 PIAF, F-63100 Clermont Fd Cedex 01, France; Clermont Université, Université Blaise Pascal, UMR 547 PIAF, BP 10448, F-63000 Clermont-Ferrand, France.
Clermont Université · FRLaboratoire Matière et Systèmes Complexes · FRPhysique et Physiologie Intégratives de l'Arbre en Environnement Fluctuant · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Land plants rely mainly on gravitropism and phototropism to control their posture and spatial orientation. In natural conditions, these two major tropisms act concurrently to create a photogravitropic equilibrium in the responsive organ. Recently, a parsimonious model was developed that accurately predicted the complete gravitropic and proprioceptive control over the movement of different organs in different species in response to gravitational stimuli. Here we show that the framework of this unifying graviproprioceptive model can be readily extended to include phototropism. The interaction between gravitropism and phototropism results in an alignment of the apical part of the organ toward a photogravitropic set-point angle. This angle is determined by a combination of the two directional stimuli, gravity and light, weighted by the ratio between the gravi- and photo-sensitivities of the plant organ. In the model, two dimensionless numbers, the graviproprioceptive number B and the photograviceptive number M, control the dynamics and the shapes of the movement. The extended model agrees well with two sets of detailed quantitative data on photogravitropic equilibrium in oat coleoptiles. It is demonstrated that the influence of light intensity I can be included in the model in a power-law-dependent relationship M(I). The numbers B and M and the related photograviceptive number D are all quantitative genetic traits that can be measured in a straightforward manner, opening the way to the phenotyping of molecular and mechanical aspects of shoot tropism.

Indexed as

Models, BiologicalComputational BiologyGravitropismPhenotypePhototropismPlant Shoots

Identifiers

PMID25692607
PMCPMC4332863
OpenAlexW2152157266

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.