Evidence map›Paper›PMID 25692303›Full record

ArticleAmerican journal of respiratory cell and molecular biology2015

Quantitative proteomics reveals an altered cystic fibrosis in vitro bronchial epithelial secretome.

Jennifer R Peters-Hall, Kristy J Brown, Dinesh K Pillai, Amarel Tomney, Lindsay M Garvin, Xiaofang Wu, Mary C Rose

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Ion channels and actin: A tale of two friends.Histology and histopathology · 2025
    Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Acquired dysfunction of CFTR underlies cystic fibrosis-like disease of the canine gallbladder.American journal of physiology. Gastrointestinal and liver physiology · 2024
    Article
  8. Specialized proresolving mediator resolvin E1 corrects the altered cystic fibrosis nasal epithelium cilia beating dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. CFTR, Cell Junctions and the Cytoskeleton.International journal of molecular sciences · 2022
    Review
  15. Article
  16. Article
  17. Article
  18. COVID-19 Usurps Host Regulatory Networks.Frontiers in pharmacology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Jennifer R Peters-HallDepartments of 1 Integrative Systems Biology and.
Kristy J BrownDepartments of 1 Integrative Systems Biology and.
Dinesh K PillaiDepartments of 1 Integrative Systems Biology and.
Amarel Tomney2 Research Center for Genetic Medicine and.
Lindsay M GarvinDepartments of 1 Integrative Systems Biology and.
Xiaofang WuDepartments of 1 Integrative Systems Biology and.
Mary C RoseDepartments of 1 Integrative Systems Biology and.
George Washington University · USIntegrity Systems (United States) · USChildren's National · USResearch Institute for Genetic and Human Therapy · US

Funding

Clinical and Translational Science Institute at Children's NationalUL1TR000075 · NCATS · CHILDREN'S RESEARCH INSTITUTE · PI GUAY-WOODFORD, LISA MARIE · 2012 to 2015
$13.7M
Child Health Research Career Development Award (CHRCDA) Program at Children's NationalK12HD001399 · NICHD · CHILDREN'S RESEARCH INSTITUTE · PI NATHAN KUPPERMANN · 2001 to 2026
$9.1M
NCMRR-DC Core Molecular & Functional Outcome Measures in Rehabilitation MedicineR24HD050846 · NICHD · CHILDREN'S RESEARCH INSTITUTE · PI KNOBLACH, SUSAN M · 2005 to 2014
$8.6M
Genetics and Genomic Approaches to Lung Diseases and Disorders in Washington, DCK12HL090020 · NHLBI · CHILDREN'S RESEARCH INSTITUTE · PI HOFFMAN, ERIC P. · 2007 to 2012
$2.0M
NCATS NIH HHS UL1 TR000075NCATS NIH HHS UL1TR000075NHLBI NIH HHS 1K12 HL090020NHLBI NIH HHS K12 HL090020NICHD NIH HHS 2R24HD050846-06NICHD NIH HHS 5K12 HD001399-12NICHD NIH HHS K12 HD001399NICHD NIH HHS R24 HD050846
6 · The paper itself

Abstract

Alterations in epithelial secretions and mucociliary clearance contribute to chronic bacterial infection in cystic fibrosis (CF) lung disease, but whether CF lungs are unchanged in the absence of infection remains controversial. A proteomic comparison of airway secretions from subjects with CF and control subjects shows alterations in key biological processes, including immune response and proteolytic activity, but it is unclear if these are due to mutant CF transmembrane conductance regulator (CFTR) and/or chronic infection. We hypothesized that the CF lung apical secretome is altered under constitutive conditions in the absence of inflammatory cells and pathogens. To test this, we performed quantitative proteomics of in vitro apical secretions from air-liquid interface cultures of three life-extended CF (ΔF508/ΔF508) and three non-CF human bronchial epithelial cells after labeling of CF cells by stable isotope labeling with amino acids in cell culture. Mass spectrometry analysis identified and quantitated 666 proteins across samples, of which 70 exhibited differential enrichment or depletion in CF secretions (±1.5-fold change; P < 0.05). The key molecular functions were innate immunity (24%), cytoskeleton/extracellular matrix organization (24%), and protease/antiprotease activity (17%). Oxidative proteins and classical complement pathway proteins that are altered in CF secretions in vivo were not altered in vitro. Specific differentially increased proteins-MUC5AC and MUC5B mucins, fibronectin, and matrix metalloproteinase-9-were validated by antibody-based assays. Overall, the in vitro CF secretome data are indicative of a constitutive airway epithelium with altered innate immunity, suggesting that downstream consequences of mutant CFTR set the stage for chronic inflammation and infection in CF airways.

Indexed as

ProteomicsBronchiCell LineChronic DiseaseCystic FibrosisHumansInflammationProteomeRespiratory MucosaProteomebronchial epithelial secretionscystic fibrosisinnate immunityquantitative proteomicssecretome

Identifiers

PMID25692303
PMCPMC4566109
OpenAlexW2036760427

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.