Evidence map›Paper›PMID 25692235›Full record

ArticleRNA biology2014

FMRP interacts with G-quadruplex structures in the 3'-UTR of its dendritic target Shank1 mRNA.

Yang Zhang, Christian M Gaetano, Kathryn R Williams, Gary J Bassell, Mihaela Rita Mihailescu

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Yang Zhanga Graduate School of Pharmaceutical Sciences; Mylan School of Pharmacy ; Duquesne University ; Pittsburgh , PA USA.
Christian M Gaetano
Kathryn R Williams
Gary J Bassell
Mihaela Rita Mihailescu
Duquesne University · USEmory University · US

Funding

Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
Role of microRNAs and RISC in activity regulated translation in neuronsR21DA033478 · NIDA · EMORY UNIVERSITY · PI BASSELL, GARY J · 2013 to 2014
$429k
Fragile X Mental Retardation Protein translation regulator function: interactionsR15HD078017 · NICHD · DUQUESNE UNIVERSITY · PI MIHAILESCU, MIHAELA R · 2013 to 2013
$394k
NICHD NIH HHS 9R15HD078017-03A1NICHD NIH HHS R15 HD078017NIDA NIH HHS R21DA033478NIGMS NIH HHS T32 GM008367
6 · The paper itself

Abstract

Fragile X syndrome (FXS), the most common cause of inherited intellectual disability, is caused by the loss of expression of the fragile X mental retardation protein (FMRP). FMRP, which regulates the transport and translation of specific mRNAs, uses its RGG box domain to bind mRNA targets that form G-quadruplex structures. One of the FMRP in vivo targets, Shank1 mRNA, encodes the master scaffold proteins of the postsynaptic density (PSD) which regulate the size and shape of dendritic spines because of their capacity to interact with many different PSD components. Due to their effect on spine morphology, altered translational regulation of Shank1 transcripts may contribute to the FXS pathology. We hypothesized that the FMRP interactions with Shank1 mRNA are mediated by the recognition of the G quadruplex structure, which has not been previously demonstrated. In this study we used biophysical techniques to analyze the Shank1 mRNA 3'-UTR and its interactions with FMRP and its phosphorylated mimic FMRP S500D. We found that the Shank1 mRNA 3 ' -UTR adopts two very stable intramolecular G-quadruplexes which are bound specifically and with high affinity by FMRP both in vitro and in vivo. These results suggest a role of G-quadruplex RNA motif as a structural element in the common mechanism of FMRP regulation of its dendritic mRNA targets.

Indexed as

G-Quadruplexes3' Untranslated RegionsAlgorithmsCircular DichroismDendritic SpinesFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeGene Expression RegulationHumansKineticsNerve Tissue ProteinsProtein BindingProtein BiosynthesisRNA, MessengerSpectrometry, FluorescenceThermodynamics3' Untranslated RegionsFragile X Messenger Ribonucleoprotein 1Nerve Tissue ProteinsRNA, MessengerSHANK1 protein, humanFMRPFragile X syndromeG-quadruplexRGG boxShank1 mRNA

Identifiers

PMID25692235
PMCPMC4615183
OpenAlexW1483915883

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.