Evidence map›Paper›PMID 25691742›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Regulation and aggregation of intrinsically disordered peptides.

Zachary A Levine, Luca Larini, Nichole E LaPointe, Stuart C Feinstein, Joan-Emma Shea

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 202 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
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  7. Analyses of exon 4a structure reveal unique properties of Big tau.bioRxiv : the preprint server for biology · 2025
    Article
  8. Article
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  10. Review
  11. Article
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  14. Intrinsic stiffness andPNAS nexus · 2025
    Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Zachary A LevineDepartments of Physics, Chemistry and Biochemistry, and.
Luca LariniDepartments of Physics, Chemistry and Biochemistry, and.
Nichole E LaPointeMolecular, Cellular, and Developmental Biology and Neuroscience Research Institute, University of California, Santa Barbara, CA 93106.
Stuart C FeinsteinMolecular, Cellular, and Developmental Biology and Neuroscience Research Institute, University of California, Santa Barbara, CA 93106.
Joan-Emma SheaDepartments of Physics, Chemistry and Biochemistry, and shea@chem.ucsb.edu.
University of California, Santa Barbara · US

Funding

NCCDPHP CDC HHS 1DP20D008702
6 · The paper itself

Abstract

Intrinsically disordered proteins (IDPs) are a unique class of proteins that have no stable native structure, a feature that allows them to adopt a wide variety of extended and compact conformations that facilitate a large number of vital physiological functions. One of the most well-known IDPs is the microtubule-associated tau protein, which regulates microtubule growth in the nervous system. However, dysfunctions in tau can lead to tau oligomerization, fibril formation, and neurodegenerative disease, including Alzheimer's disease. Using a combination of simulations and experiments, we explore the role of osmolytes in regulating the conformation and aggregation propensities of the R2/wt peptide, a fragment of tau containing the aggregating paired helical filament (PHF6*). We show that the osmolytes urea and trimethylamine N-oxide (TMAO) shift the population of IDP monomer structures, but that no new conformational ensembles emerge. Although urea halts aggregation, TMAO promotes the formation of compact oligomers (including helical oligomers) through a newly proposed mechanism of redistribution of water around the perimeter of the peptide. We put forth a "superposition of ensembles" hypothesis to rationalize the mechanism by which IDP structure and aggregation is regulated in the cell.

Indexed as

Molecular Dynamics SimulationProtein Aggregation, PathologicalHumansMethylaminesPeptidesProtein Structure, Secondarytau ProteinsUreaMAPT protein, humanMethylaminesPeptidestau ProteinstrimethyloxamineUreaintrinsically disordered proteinsmolecular dynamics simulationsosmolytesprotein foldingtau protein

Identifiers

PMID25691742
PMCPMC4352815
OpenAlexW2169693347

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.