Evidence map›Paper›PMID 25690852›Full record

ArticleNature biotechnology2015

Inducible in vivo genome editing with CRISPR-Cas9.

Lukas E Dow, Jonathan Fisher, Kevin P O'Rourke, Ashlesha Muley, Edward R Kastenhuber, Geulah Livshits, Darjus F Tschaharganeh, Nicholas D Socci, Scott W Lowe

Open access · greenAbstract read
In one paragraph

Article in Nature biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 284 papers.

0numbers the graph read from it
0cells of the map it votes in
284citing papers in PubMed
32.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

284 citing papers in PubMed, 500 citations in OpenAlex.

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224 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Lukas E Dow *Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY.
Jonathan Fisher *Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY.
Kevin P O'RourkeCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY.
Ashlesha MuleyHematology / Medical Oncology Division, Department of Medicine, Weill-Cornell Medical College, New York, NY.
Edward R KastenhuberCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY.
Geulah LivshitsCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY.
Darjus F TschaharganehCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY.
Nicholas D SocciBioinformatics Core facility, Memorial Sloan Kettering Cancer Center, New York, NY.
Scott W LoweCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY.
Memorial Sloan Kettering Cancer Center · USCornell University · USKettering University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI DAVID L SPECTOR · 1985 to 2026
$116.8M
Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Scientific ReagentsP01CA087497 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI PRIVES, CAROL · 2000 to 2021
$35.4M
The Role of Focal Oncogene Amplifications in Lung CancerP01CA129243 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Piro Lito · 2007 to 2026
$31.2M
A scalable platform for target validation in GEMM models of gastrointestinal malignancies.R01CA195787 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI LOWE, SCOTT W. · 2015 to 2017
$2.0M
Defining the genetic requirements for maintenance of colorectal cancerK22CA181280 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI DOW, LUKAS EDWARD · 2014 to 2016
$584k
Mechanisms of tumor suppression by epigenetic regulators in pancreatic cancerF32CA177072 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI LIVSHITS, GEULAH YEVGENIYA · 2013 to 2016
$168k
Intratumoral Heterogeneity and Tumor Evolution in LymphomaF31CA192835 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI KASTENHUBER, EDWARD R · 2015 to 2018
$157k
Howard Hughes Medical InstituteNCI NIH HHS 1F32CA177072-01NCI NIH HHS 1K22CA181280-01NCI NIH HHS CA-013106NCI NIH HHS F31 CA192835NCI NIH HHS F32 CA177072NCI NIH HHS K22 CA181280NCI NIH HHS P01 CA013106NCI NIH HHS P01 CA087497NCI NIH HHS P01 CA129243NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA195787NIGMS NIH HHS T32 GM007739NIGMS NIH HHS T32GM07739
6 · The paper itself

Abstract

CRISPR-Cas9-based genome editing enables the rapid genetic manipulation of any genomic locus without the need for gene targeting by homologous recombination. Here we describe a conditional transgenic approach that allows temporal control of CRISPR-Cas9 activity for inducible genome editing in adult mice. We show that doxycycline-regulated Cas9 induction enables widespread gene disruption in multiple tissues and that limiting the duration of Cas9 expression or using a Cas9(D10A) (Cas9n) variant can regulate the frequency and size of target gene modifications, respectively. Further, we show that this inducible CRISPR (iCRISPR) system can be used effectively to create biallelic mutation in multiple target loci and, thus, provides a flexible and fast platform to study loss-of-function phenotypes in vivo.

Indexed as

AnimalsClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsGenomeMiceMutagenesis, Site-DirectedRecombination, Genetic

Identifiers

PMID25690852
PMCPMC4390466
OpenAlexW2091772801

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.