Evidence map›Paper›PMID 25690103›Full record

ArticleInfection and immunity2015

Proteomic-based approach to gain insight into reprogramming of THP-1 cells exposed to Leishmania donovani over an early temporal window.

Alok Kumar Singh, Rajeev Kumar Pandey, Jair Lage Siqueira-Neto, Yong-Jun Kwon, Lucio H Freitas-Junior, Chandrima Shaha, Rentala Madhubala

Abstract read
In one paragraph

Article in Infection and immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. DNA Methylation in macrophages infected withEmerging microbes & infections · 2025
    Article
  4. Article
  5. Article
  6. Review
  7. Leishmaniasis: Immune Cells Crosstalk in Macrophage Polarization.Tropical medicine and infectious disease · 2023
    Review
  8. Article
  9. Frontiers in immunology · 2023
    Article
  10. Article
  11. Article
  12. Chromatin-Remodeling Factor BRG1 Is a Negative Modulator ofFrontiers in cellular and infection microbiology · 2022
    Article
  13. Identification of the Host Substratome ofFrontiers in cell and developmental biology · 2021
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Frontiers in immunology · 2018
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alok Kumar SinghSchool of Life Sciences, Jawaharlal Nehru University, New Delhi, India.
Rajeev Kumar PandeyCell Death and Differentiation Research Laboratory, National Institute of Immunology, New Delhi, India.
Jair Lage Siqueira-NetoInstitut Pasteur Korea, Seongnam-si, Gyeonggi-do, South Korea.
Yong-Jun KwonInstitut Pasteur Korea, Seongnam-si, Gyeonggi-do, South Korea.
Lucio H Freitas-JuniorInstitut Pasteur Korea, Seongnam-si, Gyeonggi-do, South Korea.
Chandrima ShahaCell Death and Differentiation Research Laboratory, National Institute of Immunology, New Delhi, India.
Rentala MadhubalaSchool of Life Sciences, Jawaharlal Nehru University, New Delhi, India rentala@outlook.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leishmania donovani, a protozoan parasite, is the causative agent of visceral leishmaniasis. It lives and multiplies within the harsh environment of macrophages. In order to investigate how intracellular parasite manipulate the host cell environment, we undertook a quantitative proteomic study of human monocyte-derived macrophages (THP-1) following infection with L. donovani. We used the isobaric tags for relative and absolute quantification (iTRAQ) method and liquid chromatography-tandem mass spectrometry (LC-MS/MS) to compare expression profiles of noninfected and L. donovani-infected THP-1 cells. We detected modifications of protein expression in key metabolic pathways, including glycolysis and fatty acid oxidation, suggesting a global reprogramming of cell metabolism by the parasite. An increased abundance of proteins involved in gene transcription, RNA splicing (heterogeneous nuclear ribonucleoproteins [hnRNPs]), histones, and DNA repair and replication was observed at 24 h postinfection. Proteins involved in cell survival and signal transduction were more abundant at 24 h postinfection. Several of the differentially expressed proteins had not been previously implicated in response to the parasite, while the others support the previously identified proteins. Selected proteomics results were validated by real-time PCR and immunoblot analyses. Similar changes were observed in L. donovani-infected human monocyte-derived primary macrophages. The effect of RNA interference (RNAi)-mediated gene knockdown of proteins validated the relevance of the host quantitative proteomic screen. Our findings indicate that the host cell proteome is modulated after L. donovani infection, provide evidence for global reprogramming of cell metabolism, and demonstrate the complex relations between the host and parasite at the molecular level.

Indexed as

Cell LineChromatography, LiquidGene Expression ProfilingHumansImmunoblottingLeishmania donovaniMacrophagesProteomeProteomicsReal-Time Polymerase Chain ReactionTandem Mass SpectrometryProteome

Identifiers

PMID25690103
PMCPMC4399049

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.