Evidence map›Paper›PMID 25689313›Full record

ArticlePloS one2015

Two novel SNPs in ATXN3 3' UTR may decrease age at onset of SCA3/MJD in Chinese patients.

Zhe Long, Zhao Chen, Chunrong Wang, Fengzhen Huang, Huirong Peng, Xuan Hou, Dongxue Ding, Wei Ye, Junling Wang, Qian Pan and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. A Novel Duplication in ATXN2 as Modifier for Spinocerebellar Ataxia 3 (SCA3) and C9ORF72-ALS.Movement disorders : official journal of the Movement Disorder Society · 2021
    Article
  7. Article
  8. Phenotypic variance in monozygotic twins with SCA3.Molecular genetics & genomic medicine · 2020
    Article
  9. Review
  10. Article
  11. Unravelling Endogenous MicroRNA System Dysfunction as a New Pathophysiological Mechanism in Machado-Joseph Disease.Molecular therapy : the journal of the American Society of Gene Therapy · 2017
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Zhe LongDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China.
Zhao ChenDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China.
Chunrong WangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China; Department of Neurology, Xiangtan Central Hospital, Xiangtan, Hunan 411100, P. R. China.
Fengzhen HuangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China; Department of Neurology & Institute of Translational Medicine at University of South China, the First People's Hospital of Chenzhou, Chenzhou, Hunan 423000, P. R. China.
Huirong PengDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China.
Xuan HouDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China.
Dongxue DingDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China.
Wei YeDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China.
Junling WangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China; Key Laboratory of Hunan Province in Neurodegenerative Disorders, Central South University, Changsha, Hunan 410008, P. R. China; State Key Lab of Medical Genetics, Central South University, Changsha, Hunan 410078, P. R. China.
Qian PanState Key Lab of Medical Genetics, Central South University, Changsha, Hunan 410078, P. R. China.
Jiada LiState Key Lab of Medical Genetics, Central South University, Changsha, Hunan 410078, P. R. China.
Kun XiaState Key Lab of Medical Genetics, Central South University, Changsha, Hunan 410078, P. R. China.
Beisha TangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China; Key Laboratory of Hunan Province in Neurodegenerative Disorders, Central South University, Changsha, Hunan 410008, P. R. China; State Key Lab of Medical Genetics, Central South University, Changsha, Hunan 410078, P. R. China.
Tetsuo AshizawaDepartment of Neurology, University of Florida, Gainesville, Florida, United States of America.
Hong JiangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, Hunan 410008, P. R. China; Key Laboratory of Hunan Province in Neurodegenerative Disorders, Central South University, Changsha, Hunan 410008, P. R. China; State Key Lab of Medical Genetics, Central South University, Changsha, Hunan 410078, P. R. China.
Central South University · CNXiangya Hospital Central South University · CNUniversity of Florida · USXiangyang Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spinocerebellar ataxia type 3 (SCA3), or Machado-Joseph disease (MJD), is an autosomal dominantly-inherited disease that produces progressive problems with movement. It is caused by the expansion of an area of CAG repeats in a coding region of ATXN3. The number of repeats is inversely associated with age at disease onset (AO) and is significantly associated with disease severity; however, the degree of CAG expansion only explains 50 to 70% of variance in AO. We tested two SNPs, rs709930 and rs910369, in the 3' UTR of ATXN3 gene for association with SCA3/MJD risk and with SCA3/MJD AO in an independent cohort of 170 patients with SCA3/MJD and 200 healthy controls from mainland China. rs709930 genotype frequencies were statistically significantly different between patients and controls (p = 0.001, α = 0.05). SCA3/MJD patients carrying the rs709930 A allele and rs910369 T allele experienced an earlier onset, with a decrease in AO of approximately 2 to 4 years. The two novel SNPs found in this study might be genetic modifiers for AO in SCA3/MJD.

Indexed as

3' Untranslated RegionsPolymorphism, Single NucleotideAdolescentAdultAgedAge of OnsetAllelesAsian PeopleAtaxin-3ChinaFemaleGene FrequencyGenotypeHumansMachado-Joseph DiseaseMale3' Untranslated RegionsAtaxin-3

Identifiers

PMID25689313
PMCPMC4331546
OpenAlexW1997620946

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.