Evidence map›Paper›PMID 25688971›Full record

ArticlePloS one2015

Environmental isolation of Cryptococcus gattii VGII from indoor dust from typical wooden houses in the deep Amazonas of the Rio Negro basin.

Fábio Brito-Santos, Gláucia Gonçalves Barbosa, Luciana Trilles, Marília Martins Nishikawa, Bodo Wanke, Wieland Meyer, Filipe Anibal Carvalho-Costa, Márcia dos Santos Lazéra

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Changing Climate, ChangingJournal of fungi (Basel, Switzerland) · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Cryptococcus spp. and Cryptococcosis: focusing on the infection in Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  7. Article
  8. Article
  9. Central Nervous System Cryptococcosis due toCurrent tropical medicine reports · 2022
    Review
  10. Journal of fungi (Basel, Switzerland) · 2021
    Article
  11. Environmental Status ofJournal of fungi (Basel, Switzerland) · 2021
    Review
  12. Journal of fungi (Basel, Switzerland) · 2021
    Review
  13. Cryptococcal meningitis in non-HIV patients in the State of Amazonas, Northern Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
  14. Review
  15. Article
  16. Article
  17. Cryptococcosis due toMedical mycology case reports · 2019
    Article
  18. Review
  19. Cryptococcus gattii VGII isolated from native forest and river in Northern Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fábio Brito-SantosMycology Laboratory, Evandro Chagas Clinical Research Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Gláucia Gonçalves BarbosaMycology Laboratory, Evandro Chagas Clinical Research Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Luciana TrillesMycology Laboratory, Evandro Chagas Clinical Research Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Marília Martins NishikawaNational Institute for Quality Control in Health, INCQS/FIOCRUZ, Rio de Janeiro, Brazil.
Bodo WankeMycology Laboratory, Evandro Chagas Clinical Research Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Wieland MeyerMycology Laboratory, Evandro Chagas Clinical Research Institute, FIOCRUZ, Rio de Janeiro, Brazil; Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Sydney Medical School-Westmead Hospital, Marie Bashir Institute for Infectious Diseases and Biosecurity, The University of Sydney, Westmead Millennium Institute, Sydney, New South Wales, Australia.
Filipe Anibal Carvalho-CostaLaboratory of Molecular Epidemiology and Systematics, Institute Oswaldo Cruz, FIOCRUZ, Rio de Janeiro, Brazil.
Márcia dos Santos LazéraMycology Laboratory, Evandro Chagas Clinical Research Institute, FIOCRUZ, Rio de Janeiro, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cryptococcosis is a human fungal infection of significant mortality and morbidity, especially in the meningoencephalitis form. Cryptococcosis is distributed worldwide and its agents, C. neoformans and C. gattii, present eight major molecular types-VNI-VNIV and VGI-VGIV respectively. The primary cryptococcosis caused by molecular type VGII (serotype B, MAT alpha) prevails in immunocompetent patients in the North and Northeast of Brazil, revealing an endemic regional pattern to this molecular type. Since 1999, C. gattii VGII has been involved in an ongoing outbreak in Canada, and is expanding to the Northwest of the United States, two temperate regions. Exposure to propagules dispersed in the environment, related to various organic substrates, mainly decomposing wood in and around dwellings, initiates the infection process. The present study investigated the presence of the agents of cryptococcosis in dust from dwellings in the upper Rio Negro, municipality of Santa Isabel do Rio Negro in Amazonas state. Indoor dust was collected from 51 houses, diluted and plated on bird seed agar. Dark brown colonies were identified phenotypically, and genotypically by URA5 restriction fragment length polymorphism analysis and multilocus sequence typing (MLST). The mating type was identified using pheromone-specific primers. Three of the 51 houses were positive for C. gattii molecular type VGII, MATα and MATa, showing a high prevalence of this agent. MLST studies identified eight subtypes, VGIIb (ST7), VGIIa (ST20), (ST5) and 5 new subtypes unique to the region. For the first time in the state of Amazonas, C. gattii VGII MATα and MATa were isolated from the environment and correlates with endemic cryptococcosis in this state. This is the first description of MLST subtypes on environmental isolates in the Brazilian Amazon, indicating domiciliary dust as a potential source for human infection with different subtypes of C. gattii VGII MATα and MATa.

Indexed as

Air MicrobiologyAir Pollution, IndoorDustTropical ClimateBrazilCryptococcus gattiiGeographyHumansMultilocus Sequence TypingPhenotypePhylogenyDust

Identifiers

PMID25688971
PMCPMC4331552

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.