Evidence map›Paper›PMID 25688864›Full record

ArticlePloS one2015

Investigating the role of RIO protein kinases in Caenorhabditis elegans.

Tasha K Mendes, Stevan Novakovic, Greta Raymant, Sonja E Bertram, Reza Esmaillie, Saravanapriah Nadarajan, Bert Breugelmans, Andreas Hofmann, Robin B Gasser, Monica P Colaiácovo and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Analysis ofInternational journal of molecular sciences · 2022
    Article
  4. First Evidence of Function forPathogens (Basel, Switzerland) · 2021
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Tasha K MendesDepartment of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria, Australia.
Stevan NovakovicDepartment of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria, Australia.
Greta RaymantDepartment of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria, Australia.
Sonja E BertramInstitute for Genetics, University of Cologne, Cologne, Germany.
Reza EsmaillieInstitute for Genetics, University of Cologne, Cologne, Germany.
Saravanapriah NadarajanDepartment of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America.
Bert BreugelmansFaculty of Veterinary Science, The University of Melbourne, Parkville, Victoria, Australia.
Andreas HofmannEskitis Institute for Cell & Drug Discovery, Griffith University, Brisbane, Australia.
Robin B GasserFaculty of Veterinary Science, The University of Melbourne, Parkville, Victoria, Australia.
Monica P ColaiácovoDepartment of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America.
Peter R BoagDepartment of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria, Australia.
Monash University · AUHarvard University · USUniversity of Cologne · DEUniversity of Melbourne · AUGriffith University · AU

Funding

Synaptonemal Complex Assembly and Function in MeiosisR01GM072551 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Monica P Colaiacovo · 2005 to 2026
$7.5M
Molecular mechanisms of germline DNA repair and DNA damage responseR01GM105853 · NIGMS · HARVARD MEDICAL SCHOOL · PI COLAIACOVO, MONICA P · 2014 to 2017
$1.3M
NIGMS NIH HHS R01 GM072551NIGMS NIH HHS R01 GM105853
6 · The paper itself

Abstract

RIO protein kinases (RIOKs) are a relatively conserved family of enzymes implicated in cell cycle control and ribosomal RNA processing. Despite their functional importance, they remain a poorly understood group of kinases in multicellular organisms. Here, we show that the C. elegans genome contains one member of each of the three RIOK sub-families and that each of the genes coding for them has a unique tissue expression pattern. Our analysis showed that the gene encoding RIOK-1 (riok-1) was broadly and strongly expressed. Interestingly, the intestinal expression of riok-1 was dependent upon two putative binding sites for the oxidative and xenobiotic stress response transcription factor SKN-1. RNA interference (RNAi)-mediated knock down of riok-1 resulted in germline defects, including defects in germ line stem cell proliferation, oocyte maturation and the production of endomitotic oocytes. Taken together, our findings indicate new functions for RIOK-1 in post mitotic tissues and in reproduction.

Indexed as

Amino Acid SequenceAnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsCell ProliferationFemaleGenomeGerm CellsGonadsMalePhylogenyPromoter Regions, GeneticProtein KinasesRNA, Double-StrandedRNA InterferenceCaenorhabditis elegans ProteinsProtein KinasesRNA, Double-Stranded

Identifiers

PMID25688864
PMCPMC4331490
OpenAlexW2124427159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.