Evidence map›Paper›PMID 25688856›Full record

ArticlePloS one2015

Characterization of the RelBbu Regulon in Borrelia burgdorferi Reveals Modulation of Glycerol Metabolism by (p)ppGpp.

Julia V Bugrysheva, Christopher J Pappas, Darya A Terekhova, Radha Iyer, Henry P Godfrey, Ira Schwartz, Felipe C Cabello

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 42 citations in OpenAlex.

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  11. Gene Regulation and Transcriptomics.Current issues in molecular biology · 2021
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  12. Article
  13. Interactions Between Ticks and Lyme Disease Spirochetes.Current issues in molecular biology · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Lyme Disease Frontiers: ReconcilingPathogens (Basel, Switzerland) · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Julia V BugryshevaDepartment of Microbiology and Immunology, New York Medical College, Valhalla, New York, 10595, United States of America.
Christopher J PappasDepartment of Microbiology and Immunology, New York Medical College, Valhalla, New York, 10595, United States of America.
Darya A TerekhovaDepartment of Microbiology and Immunology, New York Medical College, Valhalla, New York, 10595, United States of America.
Radha IyerDepartment of Microbiology and Immunology, New York Medical College, Valhalla, New York, 10595, United States of America.
Henry P GodfreyDepartment of Pathology, New York Medical College, Valhalla, New York, 10595, United States of America.
Ira SchwartzDepartment of Microbiology and Immunology, New York Medical College, Valhalla, New York, 10595, United States of America.
Felipe C CabelloDepartment of Microbiology and Immunology, New York Medical College, Valhalla, New York, 10595, United States of America.
New York Medical College · US

Funding

DETERMINANTS OF B BURGDORFERI HEMATOGENOUS DISSEMINATIONR01AI045801 · NIAID · NEW YORK MEDICAL COLLEGE · PI SCHWARTZ, IRA S. · 1999 to 2015
$4.9M
Regulated expression of B. burgdorferi virulence genesR01AI048856 · NIAID · NEW YORK MEDICAL COLLEGE · PI CABELLO, FELIPE CARDENAS · 2001 to 2010
$2.6M
NIAID NIH HHS 5R01 AI45801NIAID NIH HHS 5R01 AI48856-07NIAID NIH HHS R01 AI045801NIAID NIH HHS R01 AI048856
6 · The paper itself

Abstract

The bacterial stringent response is triggered by deficiencies of available nutrients and other environmental stresses. It is mediated by 5'-triphosphate-guanosine-3'-diphosphate and 5'-diphosphate-guanosine-3'-diphosphate (collectively (p)ppGpp) and generates global changes in gene expression and metabolism that enable bacteria to adapt to and survive these challenges. Borrelia burgdorferi encounters multiple stressors in its cycling between ticks and mammals that could trigger the stringent response. We have previously shown that the B. burgdorferi stringent response is mediated by a single enzyme, RelBbu, with both (p)ppGpp synthase and hydrolase activities, and that a B. burgdorferi 297 relBbu null deletion mutant was defective in adapting to stationary phase, incapable of down-regulating synthesis of rRNA and could not infect mice. We have now used this deletion mutant and microarray analysis to identify genes comprising the rel regulon in B. burgdorferi cultured at 34°C, and found that transcription of genes involved in glycerol metabolism is induced by relBbu. Culture of the wild type parental strain, the relBbu deletion mutant and its complemented derivative at 34°C and 25°C in media containing glucose or glycerol as principal carbon sources revealed a growth defect in the mutant, most evident at the lower temperature. Transcriptional analysis of the glp operon for glycerol uptake and metabolism in these three strains confirmed that relBbu was necessary and sufficient to increase transcription of this operon in the presence of glycerol at both temperatures. These results confirm and extend previous findings regarding the stringent response in B. burgdorferi. They also demonstrate that the stringent response regulates glycerol metabolism in this organism and is likely crucial for its optimal growth in ticks.

Indexed as

Borrelia burgdorferiGene DeletionGene Expression ProfilingGlucoseGlycerolGuanosine PentaphosphateGuanosine TetraphosphateHydrolasesRegulonTranscription, GeneticGlucoseGlycerolGuanosine PentaphosphateGuanosine TetraphosphateHydrolases

Identifiers

PMID25688856
PMCPMC4331090
OpenAlexW1982138514

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.