Evidence map›Paper›PMID 25688259›Full record

ArticleFrontiers in genetics2015

Genetics of kidney disease and related cardiometabolic phenotypes in Zuni Indians: the Zuni Kidney Project.

Sandra L Laston, V Saroja Voruganti, Karin Haack, Vallabh O Shah, Arlene Bobelu, Jeanette Bobelu, Donica Ghahate, Antonia M Harford, Susan S Paine, Francesca Tentori and 4 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Sandra L LastonSouth Texas Diabetes and Obesity Institute, Regional Academic Health Center, University of Texas at San Antonio Harlingen, TX, USA.
V Saroja VorugantiDepartment of Nutrition, University of North Carolina at Chapel Hill Kannapolis, NC, USA ; University of North Carolina Nutrition Research Institute, University of North Carolina at Chapel Hill Kannapolis, NC, USA.
Karin HaackDepartment of Genetics, Texas Biomedical Research Institute San Antonio, TX, USA.
Vallabh O ShahDepartment of Biochemistry, University of New Mexico School of Medicine Albuquerque, NM, USA.
Arlene BobeluDepartment of Biochemistry, University of New Mexico School of Medicine Albuquerque, NM, USA.
Jeanette BobeluDepartment of Biochemistry, University of New Mexico School of Medicine Albuquerque, NM, USA.
Donica GhahateDepartment of Biochemistry, University of New Mexico School of Medicine Albuquerque, NM, USA.
Antonia M HarfordDepartment of Biochemistry, University of New Mexico School of Medicine Albuquerque, NM, USA.
Susan S PaineDialysis Clinic, Inc., Albuquerque, NM USA.
Francesca TentoriArbor Research Collaborative for Health Ann Arbor, MI, USA.
Shelley A ColeDepartment of Genetics, Texas Biomedical Research Institute San Antonio, TX, USA.
Jean W MacCluerDepartment of Genetics, Texas Biomedical Research Institute San Antonio, TX, USA.
Anthony G ComuzzieDepartment of Genetics, Texas Biomedical Research Institute San Antonio, TX, USA ; Southwest National Primate Research Center San Antonio, TX, USA.
Philip G ZagerDialysis Clinic, Inc., Albuquerque, NM USA ; Department of Medicine, Division of Nephrology, University of New Mexico School of Medicine Albuquerque, NM, USA.
University of New Mexico · USTexas Biomedical Research Institute · USRadiology Associates of Albuquerque · USArbor Research Collaborative for Health · USUniversity of North Carolina at Chapel Hill · US

Funding

UNM HSC Clinical and Translational Science CenterUL1TR001449 · NCATS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI CAMPEN, MATTHEW J, PANDHI, NANCY · 2015 to 2024
$36.9M
Comprehensive SNP Discovery in SLC2A9. A Candidate Gene for Uric Acid NephropathyR01DK092238 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI VORUGANTI, VENKATA SAROJA · 2012 to 2015
$1.3M
NCATS NIH HHS UL1 TR001449NIDDK NIH HHS R01 DK092238
6 · The paper itself

Abstract

The objective of this study is to identify genetic factors associated with chronic kidney disease (CKD) and related cardiometabolic phenotypes among participants of the Genetics of Kidney Disease in Zuni Indians study. The study was conducted as a community-based participatory research project in the Zuni Indians, a small endogamous tribe in rural New Mexico. We recruited 998 members from 28 extended multigenerational families, ascertained through probands with CKD who had at least one sibling with CKD. We used the Illumina Infinium Human1M-Duo version 3.0 BeadChips to type 1.1 million single nucleotide polymorphisms (SNPs). Prevalence estimates for CKD, hyperuricemia, diabetes, and hypertension were 24%, 30%, 17% and 34%, respectively. We found a significant (p < 1.58 × 10(-7)) association for a SNP in a novel gene for serum creatinine (PTPLAD2). We replicated significant associations for genes with serum uric acid (SLC2A9), triglyceride levels (APOA1, BUD13, ZNF259), and total cholesterol (PVRL2). We found novel suggestive associations (p < 1.58 × 10(-6)) for SNPs in genes with systolic (OLFML2B), and diastolic blood pressure (NFIA). We identified a series of genes associated with CKD and related cardiometabolic phenotypes among Zuni Indians, a population with a high prevalence of kidney disease. Illuminating genetic variations that modulate the risk for these disorders may ultimately provide a basis for novel preventive strategies and therapeutic interventions.

Indexed as

associationkidney functionserum uric acidsingle nucleotide polymorphismstriglycerides

Identifiers

PMID25688259
PMCPMC4311707
OpenAlexW1999819760

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.