Evidence map›Paper›PMID 25686300›Full record

ArticleJournal of the American Chemical Society2015

Biochemical and EPR-spectroscopic investigation into heterologously expressed vinyl chloride reductive dehalogenase (VcrA) from Dehalococcoides mccartyi strain VS.

Anutthaman Parthasarathy, Troy A Stich, Svenja T Lohner, Ann Lesnefsky, R David Britt, Alfred M Spormann

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 81 citations in OpenAlex.

  1. Revisiting the dihaloelimination potential ofApplied and environmental microbiology · 2026
    Article
  2. Article
  3. Developing anApplied and environmental microbiology · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Frontiers in microbiology · 2023
    Article
  10. Heterologous Expression of ActiveApplied and environmental microbiology · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Anutthaman Parthasarathy†Departments of Chemical Engineering and Civil and Environmental Engineering, Stanford University, Stanford, California 94305, United States.
Troy A Stich‡Department of Chemistry, University of California, Davis, Davis, California 95616, United States.
Svenja T Lohner†Departments of Chemical Engineering and Civil and Environmental Engineering, Stanford University, Stanford, California 94305, United States.
Ann Lesnefsky†Departments of Chemical Engineering and Civil and Environmental Engineering, Stanford University, Stanford, California 94305, United States.
R David Britt‡Department of Chemistry, University of California, Davis, Davis, California 95616, United States.
Alfred M Spormann†Departments of Chemical Engineering and Civil and Environmental Engineering, Stanford University, Stanford, California 94305, United States.
Stanford University · USUniversity of California, Davis · US

Funding

Mechanisms of Radical SAM Enzymes Probed by EPR SpectroscopyR01GM104543 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BRITT, R DAVID · 2014 to 2017
$1.2M
NIGMS NIH HHS GM-104543NIGMS NIH HHS R01 GM104543
6 · The paper itself

Abstract

Reductive dehalogenases play a critical role in the microbial detoxification of aquifers contaminated with chloroethenes and chlorethanes by catalyzing the reductive elimination of a halogen. We report here the first heterologous production of vinyl chloride reductase VcrA from Dehalococcoides mccartyi strain VS. Heterologously expressed VcrA was reconstituted to its active form by addition of hydroxocobalamin/adenosylcobalamin, Fe(3+), and sulfide in the presence of mercaptoethanol. The kinetic properties of reconstituted VcrA catalyzing vinyl chloride reduction with Ti(III)-citrate as reductant and methyl viologen as mediator were similar to those obtained previously for VcrA as isolated from D. mccartyi strain VS. VcrA was also found to catalyze a novel reaction, the environmentally important dihaloelimination of 1,2-dichloroethane to ethene. Electron paramagnetic resonance (EPR) spectroscopic studies with reconstituted VcrA in the presence of mercaptoethanol revealed the presence of Cob(II)alamin. Addition of Ti(III)-citrate resulted in the appearance of a new signal characteristic of a reduced [4Fe-4S] cluster and the disappearance of the Cob(II)alamin signal. UV-vis absorption spectroscopy of Ti(III)citrate-treated samples revealed the formation of two new absorption maxima characteristic of Cob(I)alamin. No evidence for the presence of a [3Fe-4S] cluster was found. We postulate that during the reaction cycle of VcrA, a reduced [4Fe-4S] cluster reduces Co(II) to Co(I) of the enzyme-bound cobalamin. Vinyl chloride reduction to ethene would be initiated when Cob(I)alamin transfers an electron to the substrate, generating a vinyl radical as a potential reaction intermediate.

Indexed as

ChloroflexiElectron Spin Resonance SpectroscopyEscherichia coliGene ExpressionHalogenationHydrolasesOxidation-ReductionSubstrate SpecificityVinyl ChlorideHydrolasesVinyl Chloride

Identifiers

PMID25686300
PMCPMC4516053
OpenAlexW1963578456

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.