Evidence map›Paper›PMID 25684204›Full record

ArticleMolecular cell2015

Inhibition of Pro-apoptotic BAX by a noncanonical interaction mechanism.

Lauren A Barclay, Thomas E Wales, Thomas P Garner, Franziska Wachter, Susan Lee, Rachel M Guerra, Michelle L Stewart, Craig R Braun, Gregory H Bird, Evripidis Gavathiotis and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
  2. Journal of microbiology and biotechnology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Covalent inhibition of pro-apoptotic BAX.Nature chemical biology · 2024
    Article
  10. Article
  11. Review
  12. Article
  13. Mechanisms of BCL-2 family proteins in mitochondrial apoptosis.Nature reviews. Molecular cell biology · 2023
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Physiological and pharmacological modulation of BAX.Trends in pharmacological sciences · 2022
    Review

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Lauren A BarclayDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Thomas E WalesDepartment of Chemistry and Chemical Biology, Barnett Institute of Chemical and Biological Analysis, Northeastern University, Boston, MA 02115, USA.
Thomas P GarnerDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Franziska WachterDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Susan LeeDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Rachel M GuerraDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Michelle L StewartDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Craig R BraunDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Gregory H BirdDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
Evripidis GavathiotisDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
John R EngenDepartment of Chemistry and Chemical Biology, Barnett Institute of Chemical and Biological Analysis, Northeastern University, Boston, MA 02115, USA.
Loren D WalenskyDepartment of Pediatric Oncology and the Linde Program in Cancer Chemical Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA. Electronic address: loren_walensky@dfci.harvard.edu.
Dana-Farber Cancer Institute · USAlbert Einstein College of Medicine · USNortheastern University · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI STEVEN C. ALMO · 1985 to 2026
$111.2M
Training in Pharmacological SciencesT32GM007306 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI GOLAN, DAVID E. · 1985 to 2018
$6.6M
YAC TECHNOLOGY IN THE REGULATION OF A LARGE GENE, BCL2R01CA050239 · NCI · WASHINGTON UNIVERSITY · PI WALENSKY, LOREN DAVID · 1989 to 2014
$4.3M
Small Molecule Activators of Pro-apoptotic BAX for Cancer TherapyR01CA178394 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GAVATHIOTIS, EVRIPIDIS · 2014 to 2024
$3.7M
A Lexicon of Stapled Peptide Helices Engineered to Capture the Protein InteractomR01GM090299 · NIGMS · DANA-FARBER CANCER INST · PI WALENSKY, LOREN DAVID · 2009 to 2013
$2.1M
Protein conformational change upon membrane associationR01GM086507 · NIGMS · NORTHEASTERN UNIVERSITY · PI ENGEN, JOHN R · 2009 to 2012
$1.6M
Extending the applications of hydrogen exchange mass spectrometryR01GM101135 · NIGMS · NORTHEASTERN UNIVERSITY · PI ENGEN, JOHN R · 2012 to 2015
$1.2M
Targeting BAX Oligomerization in Hematologic DiseaseR00HL095929 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI GAVATHIOTIS, EVRIPIDIS · 2011 to 2013
$716k
NCI NIH HHS 5R01CA050239NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA050239NCI NIH HHS R01 CA178394NHLBI NIH HHS R00 HL095929NHLBI NIH HHS R00HL095929NIGMS NIH HHS 5R01GM090299NIGMS NIH HHS R01 GM086507NIGMS NIH HHS R01GM086507NIGMS NIH HHS R01 GM090299NIGMS NIH HHS R01 GM101135NIGMS NIH HHS R01GM101135NIGMS NIH HHS T32 GM007306NIGMS NIH HHS T32GM007306
6 · The paper itself

Abstract

BCL-2 is a negative regulator of apoptosis implicated in homeostatic and pathologic cell survival. The canonical anti-apoptotic mechanism involves entrapment of activated BAX by a groove on BCL-2, preventing BAX homo-oligomerization and mitochondrial membrane poration. The BCL-2 BH4 domain also confers anti-apoptotic functionality, but the mechanism is unknown. We find that a synthetic α-helical BH4 domain binds to BAX with nanomolar affinity and independently inhibits the conformational activation of BAX. Hydrogen-deuterium exchange mass spectrometry demonstrated that the N-terminal conformational changes in BAX induced by a triggering BIM BH3 helix were suppressed by the BCL-2 BH4 helix. Structural analyses localized the BH4 interaction site to a groove formed by residues of α1, α1-α2 loop, and α2-α3 and α5-α6 hairpins on the BAX surface. These data reveal a previously unappreciated binding site for targeted inhibition of BAX and suggest that the BCL-2 BH4 domain may participate in apoptosis blockade by a noncanonical interaction mechanism.

Indexed as

ApoptosisProtein Structure, SecondaryProtein Structure, TertiaryAmino Acid Sequencebcl-2-Associated X ProteinBinding SitesDeuterium Exchange MeasurementHeLa CellsHumansMass SpectrometryModels, MolecularMolecular Sequence DataMutationProtein BindingProtein ConformationProto-Oncogene Proteins c-bcl-2BAX protein, humanbcl-2-Associated X ProteinProto-Oncogene Proteins c-bcl-2

Identifiers

PMID25684204
PMCPMC4384643
OpenAlexW2036178581

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.