Evidence map›Paper›PMID 25682931›Full record

ArticleBehavioural brain research2015

The time course of activity-regulated cytoskeletal (ARC) gene and protein expression in the whisker-barrel circuit using two paradigms of whisker stimulation.

Aida Khodadad, P David Adelson, Jonathan Lifshitz, Theresa Currier Thomas

Open access · greenAbstract read
In one paragraph

Article in Behavioural brain research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Multimodal learning of pheromone locations.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  5. Article
  6. Article
  7. Review
  8. Familiarity with a vocal category biases the compartmental expression ofLearning & memory (Cold Spring Harbor, N.Y.) · 2017
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Aida KhodadadBarrow Neurological Institute at Phoenix Children's Hospital- Phoenix, AZ; Department of Child Health, University of Arizona College of Medicine-Phoenix, AZ; Department of Neuroscience, University of Strasbourg, France. Electronic address: khodadad@arizona.edu.
P David AdelsonBarrow Neurological Institute at Phoenix Children's Hospital- Phoenix, AZ; Department of Child Health, University of Arizona College of Medicine-Phoenix, AZ; Neuroscience Program, Arizona State University, Tempe, AZ; School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ. Electronic address: dadelson@phoenixchildrens.com.
Jonathan LifshitzBarrow Neurological Institute at Phoenix Children's Hospital- Phoenix, AZ; Department of Child Health, University of Arizona College of Medicine-Phoenix, AZ; Phoenix VA Healthcare System- Phoenix, AZ; Neuroscience Program, Arizona State University, Tempe, AZ. Electronic address: jlifshitz@arizona.edu.
Theresa Currier ThomasBarrow Neurological Institute at Phoenix Children's Hospital- Phoenix, AZ; Department of Child Health, University of Arizona College of Medicine-Phoenix, AZ; Phoenix VA Healthcare System- Phoenix, AZ. Electronic address: theresathomas@arizona.edu.
Arizona State University · USPhoenix Children's Hospital · US

Funding

Neural circuit disruption by diffuse brain injury: basis for morbidity & therapyR01NS065052 · NINDS · UNIVERSITY OF KENTUCKY · PI LIFSHITZ, JONATHAN · 2010 to 2014
$1.7M
Inhibition of synaptogenesis mitigates late-onset post-traumatic morbidity in ratR03NS077098 · NINDS · UNIVERSITY OF ARIZONA · PI LIFSHITZ, JONATHAN · 2012 to 2013
$149k
NINDS NIH HHS NIHR01NS-065052NINDS NIH HHS NIHR03NS-077098NINDS NIH HHS R01 NS065052NINDS NIH HHS R03 NS077098
6 · The paper itself

Abstract

Immediate early genes have previously demonstrated a rapid increase in gene expression after various behavioral paradigms. The main focus of this article is to identify a molecular marker of circuit activation after manual whisker stimulation or exploration of a novel environment. To this end, we investigated the dynamics of ARC transcription in adult male rats during whisker somatosensation throughout the whisker barrel circuit. At various time points, tissue was biopsied from the ventral posterior medial nucleus (VPM) of the thalamus, primary somatosensory barrel field (S1BF) cortex and hippocampus for quantification using real-time PCR and western blot. Our results show that there were no significant differences in ARC gene or protein expression in the VPM after both types of stimulation. However, manual whisker stimulation resulted in increased ARC gene expression at 15, 30, 60 and 300 min in the S1BF, and 15 min in the hippocampus (p<0.05). Also, exploration of a novel environment resulted in increased ARC mRNA expression at 15 and 30 min in the S1BF and at 15 min in the hippocampus (p<0.05). The type of stimulation (manual versus exploration of a novel environment) influenced the magnitude of ARC gene expression in the S1BF (p<0.05). These data are the first to demonstrate that ARC is a specific, quantifiable and input dependent molecular marker of circuit activation which can serve to quantify the impact of brain injury and subsequent rehabilitation on whisker sensation.

Indexed as

AnimalsBlotting, WesternCytoskeletal ProteinsExploratory BehaviorGene ExpressionHippocampusMaleNerve Tissue ProteinsPhysical StimulationRats, Sprague-DawleyReal-Time Polymerase Chain ReactionRNA, MessengerSomatosensory CortexTime FactorsTouch PerceptionVentral Thalamic Nucleiactivity regulated cytoskeletal-associated proteinCytoskeletal ProteinsNerve Tissue ProteinsRNA, MessengerARCHippocampusS1BFVPMWhisker stimulation

Identifiers

PMID25682931
PMCPMC5574192
OpenAlexW2001560007

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.